Gene : Glyma.09G052000 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  520
Name:  ? Glyma.09G052000 Secondary Identifier:  ? PAC:30484522
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G052000 0.5kb upstream 0.5kb upstream 8014 true Chr09: 4519979-4527992 Glycine max
Glyma.09G052000 0.5kb upstream 0.5kb upstream 500 false Chr09: 4527493-4527992 Glycine max
Glyma.09G052000 0.5kb downstream 0.5kb downstream 8014 true Chr09: 4519479-4527492 Glycine max
Glyma.09G052000 0.5kb downstream 0.5kb downstream 500 false Chr09: 4519479-4519978 Glycine max
Glyma.09G052000 1.0kb upstream 1.0kb upstream 8514 true Chr09: 4519979-4528492 Glycine max
Glyma.09G052000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4527493-4528492 Glycine max
Glyma.09G052000 1.0kb downstream 1.0kb downstream 8514 true Chr09: 4518979-4527492 Glycine max
Glyma.09G052000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4518979-4519978 Glycine max
Glyma.09G052000 2.0kb upstream 2.0kb upstream 9514 true Chr09: 4519979-4529492 Glycine max
Glyma.09G052000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4527493-4529492 Glycine max
Glyma.09G052000 2.0kb downstream 2.0kb downstream 9514 true Chr09: 4517979-4527492 Glycine max
Glyma.09G052000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4517979-4519978 Glycine max
Glyma.09G052000 5.0kb upstream 5.0kb upstream 12514 true Chr09: 4519979-4532492 Glycine max
Glyma.09G052000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4527493-4532492 Glycine max
Glyma.09G052000 5.0kb downstream 5.0kb downstream 12514 true Chr09: 4514979-4527492 Glycine max
Glyma.09G052000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4514979-4519978 Glycine max
Glyma.09G052000 10.0kb upstream 10.0kb upstream 17514 true Chr09: 4519979-4537492 Glycine max
Glyma.09G052000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4527493-4537492 Glycine max
Glyma.09G052000 10.0kb downstream 10.0kb downstream 17514 true Chr09: 4509979-4527492 Glycine max
Glyma.09G052000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4509979-4519978 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311207 5265 Fabidae View MSA
124069200 5270 Rosid View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.42392 0.0 25.1452    
cufflinks 2.69555 0.0 7.72909   Low
cufflinks 5.1416 0.0 13.9036    
cufflinks 5.37393 0.0 14.5223    
cufflinks 5.68427 0.0 15.3299    
cufflinks 18.4295 0.0 50.5989   High
cufflinks 5.64037 0.0 15.2218    
cufflinks 6.30202 0.0 16.9178    
cufflinks 5.60272 0.0 15.1122    
cufflinks 6.451       High
cufflinks 4.818        
cufflinks 2.566        
cufflinks 3.225        
cufflinks 1.898       Low
cufflinks 2.752        
cufflinks 3.272        
cufflinks 11.571     High High
cufflinks 2.206       Low
cufflinks 3.138        
cufflinks 3.463        
cufflinks 4.87        
cufflinks 3.349        
cufflinks 4.406        
cufflinks 5.314        
cufflinks 3.159        
cufflinks 7.141     High High

0 Strain