Gene : Glyma.09G040200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31875:SF6 - PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4-RELATED Genomic Order:  402
Name:  ? Glyma.09G040200 Secondary Identifier:  ? PAC:30484961
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G040200 0.5kb upstream 0.5kb upstream 3440 true Chr09: 3353458-3356897 Glycine max
Glyma.09G040200 0.5kb upstream 0.5kb upstream 500 false Chr09: 3353458-3353957 Glycine max
Glyma.09G040200 0.5kb downstream 0.5kb downstream 3440 true Chr09: 3353958-3357397 Glycine max
Glyma.09G040200 0.5kb downstream 0.5kb downstream 500 false Chr09: 3356898-3357397 Glycine max
Glyma.09G040200 1.0kb upstream 1.0kb upstream 3940 true Chr09: 3352958-3356897 Glycine max
Glyma.09G040200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3352958-3353957 Glycine max
Glyma.09G040200 1.0kb downstream 1.0kb downstream 3940 true Chr09: 3353958-3357897 Glycine max
Glyma.09G040200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3356898-3357897 Glycine max
Glyma.09G040200 2.0kb upstream 2.0kb upstream 4940 true Chr09: 3351958-3356897 Glycine max
Glyma.09G040200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3351958-3353957 Glycine max
Glyma.09G040200 2.0kb downstream 2.0kb downstream 4940 true Chr09: 3353958-3358897 Glycine max
Glyma.09G040200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3356898-3358897 Glycine max
Glyma.09G040200 5.0kb upstream 5.0kb upstream 7940 true Chr09: 3348958-3356897 Glycine max
Glyma.09G040200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3348958-3353957 Glycine max
Glyma.09G040200 5.0kb downstream 5.0kb downstream 7940 true Chr09: 3353958-3361897 Glycine max
Glyma.09G040200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3356898-3361897 Glycine max
Glyma.09G040200 10.0kb upstream 10.0kb upstream 12940 true Chr09: 3343958-3356897 Glycine max
Glyma.09G040200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3343958-3353957 Glycine max
Glyma.09G040200 10.0kb downstream 10.0kb downstream 12940 true Chr09: 3353958-3366897 Glycine max
Glyma.09G040200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3356898-3366897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308140 5265 Fabidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2995 0.0 41.6113    
cufflinks 20.5815 0.0 55.1683 High  
cufflinks 14.0162 0.0 38.2445    
cufflinks 24.1127 0.0 64.3992 High  
cufflinks 16.432 0.0 44.5012    
cufflinks 9.27781 0.0 26.3651   Low
cufflinks 28.2223 0.0 75.2934 High High
cufflinks 20.2448 0.0 54.2826    
cufflinks 18.1979 0.0 48.9956    
cufflinks 4.355        
cufflinks 2.795        
cufflinks 5.835        
cufflinks 2.503       Low
cufflinks 3.674        
cufflinks 7.013     High  
cufflinks 6.732        
cufflinks 1.931       Low
cufflinks 8.821     High High
cufflinks 6.69        
cufflinks 8.68     High High
cufflinks 2.924        
cufflinks 8.152     High High
cufflinks 4.983        
cufflinks 3.089        
cufflinks 8.874     High High
cufflinks 2.514       Low

0 Strain