Gene : Glyma.09G043100 G. max Wm82.a2.v1
Defline:  (1 of 24) PTHR11886 - DYNEIN LIGHT CHAIN Genomic Order:  431
Name:  ? Glyma.09G043100 Secondary Identifier:  ? PAC:30484166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G043100 0.5kb upstream 0.5kb upstream 7233 true Chr09: 3679536-3686768 Glycine max
Glyma.09G043100 0.5kb upstream 0.5kb upstream 500 false Chr09: 3686269-3686768 Glycine max
Glyma.09G043100 0.5kb downstream 0.5kb downstream 7233 true Chr09: 3679036-3686268 Glycine max
Glyma.09G043100 0.5kb downstream 0.5kb downstream 500 false Chr09: 3679036-3679535 Glycine max
Glyma.09G043100 1.0kb upstream 1.0kb upstream 7733 true Chr09: 3679536-3687268 Glycine max
Glyma.09G043100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3686269-3687268 Glycine max
Glyma.09G043100 1.0kb downstream 1.0kb downstream 7733 true Chr09: 3678536-3686268 Glycine max
Glyma.09G043100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3678536-3679535 Glycine max
Glyma.09G043100 2.0kb upstream 2.0kb upstream 8733 true Chr09: 3679536-3688268 Glycine max
Glyma.09G043100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3686269-3688268 Glycine max
Glyma.09G043100 2.0kb downstream 2.0kb downstream 8733 true Chr09: 3677536-3686268 Glycine max
Glyma.09G043100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3677536-3679535 Glycine max
Glyma.09G043100 5.0kb upstream 5.0kb upstream 11733 true Chr09: 3679536-3691268 Glycine max
Glyma.09G043100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3686269-3691268 Glycine max
Glyma.09G043100 5.0kb downstream 5.0kb downstream 11733 true Chr09: 3674536-3686268 Glycine max
Glyma.09G043100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3674536-3679535 Glycine max
Glyma.09G043100 10.0kb upstream 10.0kb upstream 16733 true Chr09: 3679536-3696268 Glycine max
Glyma.09G043100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3686269-3696268 Glycine max
Glyma.09G043100 10.0kb downstream 10.0kb downstream 16733 true Chr09: 3669536-3686268 Glycine max
Glyma.09G043100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3669536-3679535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299414 5265 Fabidae View MSA
124069014 5270 Rosid View MSA
123750376 5271 Pentapetalae View MSA
122793748 5272 Eudicot View MSA
122050709 5273 Angiosperm View MSA
121351577 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6675 0.0 49.4313   Low
cufflinks 27.2004 0.0 85.0671 High  
cufflinks 26.0387 0.0 95.3923 High  
cufflinks 14.58 0.0 51.9866   Low
cufflinks 18.0683 0.0 60.1712    
cufflinks 20.9188 0.0 68.4685    
cufflinks 49.7978 0.0 150.947 High High
cufflinks 19.6524 0.0 65.027    
cufflinks 18.9951 0.0 63.0702    
cufflinks 1.084        
cufflinks 0.394       Low
cufflinks 1.416       High
cufflinks 1.208        
cufflinks 1.028        
cufflinks 0.329       Low
cufflinks 1.021        
cufflinks 0.366       Low
cufflinks 0.978        
cufflinks 1.278       High
cufflinks 0.879        
cufflinks 0.561        
cufflinks 0.885        
cufflinks 0.92        
cufflinks 0.611        
cufflinks 0.777        
cufflinks 0.595        

0 Strain