Gene : Glyma.09G047100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22880:SF163 - TRANSCRIPTION FACTOR GTE1 Genomic Order:  471
Name:  ? Glyma.09G047100 Secondary Identifier:  ? PAC:30486401
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G047100 0.5kb upstream 0.5kb upstream 3533 true Chr09: 4058770-4062302 Glycine max
Glyma.09G047100 0.5kb upstream 0.5kb upstream 500 false Chr09: 4061803-4062302 Glycine max
Glyma.09G047100 0.5kb downstream 0.5kb downstream 3533 true Chr09: 4058270-4061802 Glycine max
Glyma.09G047100 0.5kb downstream 0.5kb downstream 500 false Chr09: 4058270-4058769 Glycine max
Glyma.09G047100 1.0kb upstream 1.0kb upstream 4033 true Chr09: 4058770-4062802 Glycine max
Glyma.09G047100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4061803-4062802 Glycine max
Glyma.09G047100 1.0kb downstream 1.0kb downstream 4033 true Chr09: 4057770-4061802 Glycine max
Glyma.09G047100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4057770-4058769 Glycine max
Glyma.09G047100 2.0kb upstream 2.0kb upstream 5033 true Chr09: 4058770-4063802 Glycine max
Glyma.09G047100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4061803-4063802 Glycine max
Glyma.09G047100 2.0kb downstream 2.0kb downstream 5033 true Chr09: 4056770-4061802 Glycine max
Glyma.09G047100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4056770-4058769 Glycine max
Glyma.09G047100 5.0kb upstream 5.0kb upstream 8033 true Chr09: 4058770-4066802 Glycine max
Glyma.09G047100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4061803-4066802 Glycine max
Glyma.09G047100 5.0kb downstream 5.0kb downstream 8033 true Chr09: 4053770-4061802 Glycine max
Glyma.09G047100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4053770-4058769 Glycine max
Glyma.09G047100 10.0kb upstream 10.0kb upstream 13033 true Chr09: 4058770-4071802 Glycine max
Glyma.09G047100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4061803-4071802 Glycine max
Glyma.09G047100 10.0kb downstream 10.0kb downstream 13033 true Chr09: 4048770-4061802 Glycine max
Glyma.09G047100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4048770-4058769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315825 5265 Fabidae View MSA
124051431 5270 Rosid View MSA
123745671 5271 Pentapetalae View MSA
122792234 5272 Eudicot View MSA
122042971 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121343970 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0176168 0.0 0.0833494 Low Low
cufflinks 0.0304551 0.0 0.136659 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0546971 0.0 0.234406 Low High
cufflinks 0.0252002 0.0 0.115422 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.018     Low  
cufflinks 0.075     Low High
cufflinks 0.01     Low Low
cufflinks 0.062     Low High
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.014     Low  
cufflinks 0.017     Low  
cufflinks 0.008     Low Low
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.032     Low  
cufflinks 0.038     Low  

0 Strain