Gene : Glyma.09G028000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF01055//PF13802//PF16863 - Glycosyl hydrolases family 31 (Glyco_hydro_31) // Galactose mutarotase-like (Gal_mutarotas_2) // N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase (NtCtMGAM_N) Genomic Order:  280
Name:  ? Glyma.09G028000 Secondary Identifier:  ? PAC:30486574
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G028000 0.5kb upstream 0.5kb upstream 7442 true Chr09: 2299047-2306488 Glycine max
Glyma.09G028000 0.5kb upstream 0.5kb upstream 500 false Chr09: 2305989-2306488 Glycine max
Glyma.09G028000 0.5kb downstream 0.5kb downstream 7442 true Chr09: 2298547-2305988 Glycine max
Glyma.09G028000 0.5kb downstream 0.5kb downstream 500 false Chr09: 2298547-2299046 Glycine max
Glyma.09G028000 1.0kb upstream 1.0kb upstream 7942 true Chr09: 2299047-2306988 Glycine max
Glyma.09G028000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2305989-2306988 Glycine max
Glyma.09G028000 1.0kb downstream 1.0kb downstream 7942 true Chr09: 2298047-2305988 Glycine max
Glyma.09G028000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2298047-2299046 Glycine max
Glyma.09G028000 2.0kb upstream 2.0kb upstream 8942 true Chr09: 2299047-2307988 Glycine max
Glyma.09G028000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2305989-2307988 Glycine max
Glyma.09G028000 2.0kb downstream 2.0kb downstream 8942 true Chr09: 2297047-2305988 Glycine max
Glyma.09G028000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2297047-2299046 Glycine max
Glyma.09G028000 5.0kb upstream 5.0kb upstream 11942 true Chr09: 2299047-2310988 Glycine max
Glyma.09G028000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2305989-2310988 Glycine max
Glyma.09G028000 5.0kb downstream 5.0kb downstream 11942 true Chr09: 2294047-2305988 Glycine max
Glyma.09G028000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2294047-2299046 Glycine max
Glyma.09G028000 10.0kb upstream 10.0kb upstream 16942 true Chr09: 2299047-2315988 Glycine max
Glyma.09G028000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2305989-2315988 Glycine max
Glyma.09G028000 10.0kb downstream 10.0kb downstream 16942 true Chr09: 2289047-2305988 Glycine max
Glyma.09G028000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2289047-2299046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304453 5265 Fabidae View MSA
124063402 5270 Rosid View MSA
123748401 5271 Pentapetalae View MSA
122786472 5272 Eudicot View MSA
122047200 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9897 0.0 40.2835   High
cufflinks 1.90857 0.0 5.83322    
cufflinks 8.04268 0.0 21.5073    
cufflinks 10.0903 0.0 26.9197    
cufflinks 2.58607 0.0 7.59169    
cufflinks 0.5046 0.0 1.79973   Low
cufflinks 1.46238 0.0 4.6554    
cufflinks 3.347 0.0 9.49229    
cufflinks 5.43427 0.0 14.7874    
cufflinks 5.141        
cufflinks 0.138       Low
cufflinks 6.538       High
cufflinks 1.421        
cufflinks 0.368       Low
cufflinks 2.708        
cufflinks 4.982        
cufflinks 0.524        
cufflinks 4.548        
cufflinks 2.83        
cufflinks 1.903        
cufflinks 0.17       Low
cufflinks 5.397        
cufflinks 5.337        
cufflinks 0.521        
cufflinks 1.785        
cufflinks 0.622        

0 Strain