Gene : Glyma.09G072500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00059 - Lectin C-type domain (Lectin_C) Genomic Order:  725
Name:  ? Glyma.09G072500 Secondary Identifier:  ? PAC:30485749
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G072500 0.5kb upstream 0.5kb upstream 6227 true Chr09: 7534827-7541053 Glycine max
Glyma.09G072500 0.5kb upstream 0.5kb upstream 500 false Chr09: 7540554-7541053 Glycine max
Glyma.09G072500 0.5kb downstream 0.5kb downstream 6227 true Chr09: 7534327-7540553 Glycine max
Glyma.09G072500 0.5kb downstream 0.5kb downstream 500 false Chr09: 7534327-7534826 Glycine max
Glyma.09G072500 1.0kb upstream 1.0kb upstream 6727 true Chr09: 7534827-7541553 Glycine max
Glyma.09G072500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7540554-7541553 Glycine max
Glyma.09G072500 1.0kb downstream 1.0kb downstream 6727 true Chr09: 7533827-7540553 Glycine max
Glyma.09G072500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7533827-7534826 Glycine max
Glyma.09G072500 2.0kb upstream 2.0kb upstream 7727 true Chr09: 7534827-7542553 Glycine max
Glyma.09G072500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7540554-7542553 Glycine max
Glyma.09G072500 2.0kb downstream 2.0kb downstream 7727 true Chr09: 7532827-7540553 Glycine max
Glyma.09G072500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7532827-7534826 Glycine max
Glyma.09G072500 5.0kb upstream 5.0kb upstream 10727 true Chr09: 7534827-7545553 Glycine max
Glyma.09G072500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7540554-7545553 Glycine max
Glyma.09G072500 5.0kb downstream 5.0kb downstream 10727 true Chr09: 7529827-7540553 Glycine max
Glyma.09G072500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7529827-7534826 Glycine max
Glyma.09G072500 10.0kb upstream 10.0kb upstream 15727 true Chr09: 7534827-7550553 Glycine max
Glyma.09G072500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7540554-7550553 Glycine max
Glyma.09G072500 10.0kb downstream 10.0kb downstream 15727 true Chr09: 7524827-7540553 Glycine max
Glyma.09G072500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7524827-7534826 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308117 5265 Fabidae View MSA
124063336 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.16118 0.0 23.1365    
cufflinks 10.1316 0.0 35.6117   High
cufflinks 6.70345 0.0 24.668    
cufflinks 5.56907 0.0 21.394    
cufflinks 5.85779 0.0 22.4601    
cufflinks 7.17258 0.0 26.3207    
cufflinks 7.03176 0.0 26.0938    
cufflinks 6.66553 0.0 24.4365    
cufflinks 4.62863 0.0 18.6736   Low
cufflinks 0.912        
cufflinks 0.379       Low
cufflinks 1.381        
cufflinks 1.122        
cufflinks 1.423        
cufflinks 0.432       Low
cufflinks 1.19        
cufflinks 0.389       Low
cufflinks 1.993       High
cufflinks 2.636       High
cufflinks 1.085        
cufflinks 0.529        
cufflinks 1.316        
cufflinks 1.626        
cufflinks 0.585        
cufflinks 1.216        
cufflinks 0.352       Low

0 Strain