Gene : Glyma.09G073900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  739
Name:  ? Glyma.09G073900 Secondary Identifier:  ? PAC:30483024
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G073900 0.5kb upstream 0.5kb upstream 1700 true Chr09: 7920912-7922611 Glycine max
Glyma.09G073900 0.5kb upstream 0.5kb upstream 500 false Chr09: 7922112-7922611 Glycine max
Glyma.09G073900 0.5kb downstream 0.5kb downstream 1700 true Chr09: 7920412-7922111 Glycine max
Glyma.09G073900 0.5kb downstream 0.5kb downstream 500 false Chr09: 7920412-7920911 Glycine max
Glyma.09G073900 1.0kb upstream 1.0kb upstream 2200 true Chr09: 7920912-7923111 Glycine max
Glyma.09G073900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7922112-7923111 Glycine max
Glyma.09G073900 1.0kb downstream 1.0kb downstream 2200 true Chr09: 7919912-7922111 Glycine max
Glyma.09G073900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7919912-7920911 Glycine max
Glyma.09G073900 2.0kb upstream 2.0kb upstream 3200 true Chr09: 7920912-7924111 Glycine max
Glyma.09G073900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7922112-7924111 Glycine max
Glyma.09G073900 2.0kb downstream 2.0kb downstream 3200 true Chr09: 7918912-7922111 Glycine max
Glyma.09G073900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7918912-7920911 Glycine max
Glyma.09G073900 5.0kb upstream 5.0kb upstream 6200 true Chr09: 7920912-7927111 Glycine max
Glyma.09G073900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7922112-7927111 Glycine max
Glyma.09G073900 5.0kb downstream 5.0kb downstream 6200 true Chr09: 7915912-7922111 Glycine max
Glyma.09G073900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7915912-7920911 Glycine max
Glyma.09G073900 10.0kb upstream 10.0kb upstream 11200 true Chr09: 7920912-7932111 Glycine max
Glyma.09G073900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7922112-7932111 Glycine max
Glyma.09G073900 10.0kb downstream 10.0kb downstream 11200 true Chr09: 7910912-7922111 Glycine max
Glyma.09G073900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7910912-7920911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243302 5265 Fabidae Singleton cluster - no MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.669 0.0 165.045 High High
cufflinks 74.6371 0.0 206.193 High High
cufflinks 6.92979 0.0 20.7993    
cufflinks 19.1856 0.0 51.9218    
cufflinks 2.18717 0.0 7.61369   Low
cufflinks 5.0467 0.0 15.8577    
cufflinks 18.5522 0.0 50.3188    
cufflinks 15.0258 0.0 41.3311    
cufflinks 0.984794 0.0 3.62456   Low
cufflinks 48.841     High  
cufflinks 0.091        
cufflinks 20.861     High  
cufflinks 0.014     Low Low
cufflinks 0.015     Low Low
cufflinks 0.215        
cufflinks 182.976     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 27.93     High  
cufflinks 37.923     High  
cufflinks 208.185     High High
cufflinks 0.018     Low Low
cufflinks 200.592     High High
cufflinks 144.754     High  
cufflinks 0.083        
cufflinks 216.313     High High
cufflinks 0.06     Low  

0 Strain