Gene : Glyma.09G107400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11389:SF374 - ZINC-FINGER TRANSCRIPTION FACTOR Genomic Order:  1074
Name:  ? Glyma.09G107400 Secondary Identifier:  ? PAC:30485392
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G107400 0.5kb upstream 0.5kb upstream 2289 true Chr09: 20313430-20315718 Glycine max
Glyma.09G107400 0.5kb upstream 0.5kb upstream 500 false Chr09: 20315219-20315718 Glycine max
Glyma.09G107400 0.5kb downstream 0.5kb downstream 2289 true Chr09: 20312930-20315218 Glycine max
Glyma.09G107400 0.5kb downstream 0.5kb downstream 500 false Chr09: 20312930-20313429 Glycine max
Glyma.09G107400 1.0kb upstream 1.0kb upstream 2789 true Chr09: 20313430-20316218 Glycine max
Glyma.09G107400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 20315219-20316218 Glycine max
Glyma.09G107400 1.0kb downstream 1.0kb downstream 2789 true Chr09: 20312430-20315218 Glycine max
Glyma.09G107400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 20312430-20313429 Glycine max
Glyma.09G107400 2.0kb upstream 2.0kb upstream 3789 true Chr09: 20313430-20317218 Glycine max
Glyma.09G107400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 20315219-20317218 Glycine max
Glyma.09G107400 2.0kb downstream 2.0kb downstream 3789 true Chr09: 20311430-20315218 Glycine max
Glyma.09G107400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 20311430-20313429 Glycine max
Glyma.09G107400 5.0kb upstream 5.0kb upstream 6789 true Chr09: 20313430-20320218 Glycine max
Glyma.09G107400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 20315219-20320218 Glycine max
Glyma.09G107400 5.0kb downstream 5.0kb downstream 6789 true Chr09: 20308430-20315218 Glycine max
Glyma.09G107400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 20308430-20313429 Glycine max
Glyma.09G107400 10.0kb upstream 10.0kb upstream 11789 true Chr09: 20313430-20325218 Glycine max
Glyma.09G107400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 20315219-20325218 Glycine max
Glyma.09G107400 10.0kb downstream 10.0kb downstream 11789 true Chr09: 20303430-20315218 Glycine max
Glyma.09G107400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 20303430-20313429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311554 5265 Fabidae View MSA
124068239 5270 Rosid View MSA
123744068 5271 Pentapetalae View MSA
122791696 5272 Eudicot View MSA
122047556 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.0539 0.0 12.3994   High
cufflinks 2.25535 0.0 7.51125    
cufflinks 0.202891 0.0 0.790271 Low  
cufflinks 2.96928 0.0 9.51056    
cufflinks 0.0735381 0.0 0.296336 Low  
cufflinks 0.0277053 0.0 0.118732 Low Low
cufflinks 7.34263 0.0 20.7423   High
cufflinks 0.177629 0.0 0.693564 Low  
cufflinks 0.0748132 0.0 0.301712 Low  
cufflinks 0.065     Low  
cufflinks 0.011     Low Low
cufflinks 0.326        
cufflinks 0.061     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.249     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.267        
cufflinks 1.11        
cufflinks 6.309       High
cufflinks 0.012     Low Low
cufflinks 8.143     High High
cufflinks 4.895       High
cufflinks 0.01     Low Low
cufflinks 4.96       High
cufflinks 0.009     Low Low

0 Strain