Gene : Glyma.09G112100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1121
Name:  ? Glyma.09G112100 Secondary Identifier:  ? PAC:30483866
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G112100 0.5kb upstream 0.5kb upstream 2105 true Chr09: 22252482-22254586 Glycine max
Glyma.09G112100 0.5kb upstream 0.5kb upstream 500 false Chr09: 22252482-22252981 Glycine max
Glyma.09G112100 0.5kb downstream 0.5kb downstream 2105 true Chr09: 22252982-22255086 Glycine max
Glyma.09G112100 0.5kb downstream 0.5kb downstream 500 false Chr09: 22254587-22255086 Glycine max
Glyma.09G112100 1.0kb upstream 1.0kb upstream 2605 true Chr09: 22251982-22254586 Glycine max
Glyma.09G112100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22251982-22252981 Glycine max
Glyma.09G112100 1.0kb downstream 1.0kb downstream 2605 true Chr09: 22252982-22255586 Glycine max
Glyma.09G112100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22254587-22255586 Glycine max
Glyma.09G112100 2.0kb upstream 2.0kb upstream 3605 true Chr09: 22250982-22254586 Glycine max
Glyma.09G112100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22250982-22252981 Glycine max
Glyma.09G112100 2.0kb downstream 2.0kb downstream 3605 true Chr09: 22252982-22256586 Glycine max
Glyma.09G112100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22254587-22256586 Glycine max
Glyma.09G112100 5.0kb upstream 5.0kb upstream 6605 true Chr09: 22247982-22254586 Glycine max
Glyma.09G112100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22247982-22252981 Glycine max
Glyma.09G112100 5.0kb downstream 5.0kb downstream 6605 true Chr09: 22252982-22259586 Glycine max
Glyma.09G112100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22254587-22259586 Glycine max
Glyma.09G112100 10.0kb upstream 10.0kb upstream 11605 true Chr09: 22242982-22254586 Glycine max
Glyma.09G112100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22242982-22252981 Glycine max
Glyma.09G112100 10.0kb downstream 10.0kb downstream 11605 true Chr09: 22252982-22264586 Glycine max
Glyma.09G112100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22254587-22264586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296727 5265 Fabidae View MSA
124038723 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0817578 0.0 0.333553 Low  
cufflinks 2.46442 0.0 8.42415   High
cufflinks 0.15207 0.0 0.603466 Low  
cufflinks 0.772183 0.0 2.8536    
cufflinks 4.03295 0.0 12.8459   High
cufflinks 0.168126 0.0 0.663897 Low  
cufflinks 0.0392739 0.0 0.167471 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.207        
cufflinks 0.161        
cufflinks 0.668       High
cufflinks 0.181        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.211        
cufflinks 2.595       High
cufflinks 0.038     Low  
cufflinks 0.023     Low Low
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.169        
cufflinks 0.023     Low Low
cufflinks 0.084        

0 Strain