Gene : Glyma.09G103400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  1034
Name:  ? Glyma.09G103400 Secondary Identifier:  ? PAC:30486127
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G103400 0.5kb upstream 0.5kb upstream 3342 true Chr09: 19118997-19122338 Glycine max
Glyma.09G103400 0.5kb upstream 0.5kb upstream 500 false Chr09: 19121839-19122338 Glycine max
Glyma.09G103400 0.5kb downstream 0.5kb downstream 3342 true Chr09: 19118497-19121838 Glycine max
Glyma.09G103400 0.5kb downstream 0.5kb downstream 500 false Chr09: 19118497-19118996 Glycine max
Glyma.09G103400 1.0kb upstream 1.0kb upstream 3842 true Chr09: 19118997-19122838 Glycine max
Glyma.09G103400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19121839-19122838 Glycine max
Glyma.09G103400 1.0kb downstream 1.0kb downstream 3842 true Chr09: 19117997-19121838 Glycine max
Glyma.09G103400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19117997-19118996 Glycine max
Glyma.09G103400 2.0kb upstream 2.0kb upstream 4842 true Chr09: 19118997-19123838 Glycine max
Glyma.09G103400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19121839-19123838 Glycine max
Glyma.09G103400 2.0kb downstream 2.0kb downstream 4842 true Chr09: 19116997-19121838 Glycine max
Glyma.09G103400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19116997-19118996 Glycine max
Glyma.09G103400 5.0kb upstream 5.0kb upstream 7842 true Chr09: 19118997-19126838 Glycine max
Glyma.09G103400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19121839-19126838 Glycine max
Glyma.09G103400 5.0kb downstream 5.0kb downstream 7842 true Chr09: 19113997-19121838 Glycine max
Glyma.09G103400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19113997-19118996 Glycine max
Glyma.09G103400 10.0kb upstream 10.0kb upstream 12842 true Chr09: 19118997-19131838 Glycine max
Glyma.09G103400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19121839-19131838 Glycine max
Glyma.09G103400 10.0kb downstream 10.0kb downstream 12842 true Chr09: 19108997-19121838 Glycine max
Glyma.09G103400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19108997-19118996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 155.675 0.0 470.7 High  
cufflinks 148.246 0.0 681.633 High  
cufflinks 63.2138 0.0 231.363 High Low
cufflinks 118.467 0.0 502.795 High  
cufflinks 291.044 0.0 1546.82 High High
cufflinks 171.66 0.0 708.544 High  
cufflinks 157.373 0.0 475.466 High  
cufflinks 160.261 0.0 648.04 High  
cufflinks 182.569 0.0 590.627 High  
cufflinks 20.846     High  
cufflinks 3.529       Low
cufflinks 16.238     High  
cufflinks 57.673     High High
cufflinks 83.834     High High
cufflinks 6.394     High  
cufflinks 14.141     High  
cufflinks 13.29     High  
cufflinks 17.287     High  
cufflinks 24.291     High  
cufflinks 9.17     High  
cufflinks 7.98     High  
cufflinks 10.22     High  
cufflinks 22.363     High  
cufflinks 5.187       Low
cufflinks 11.67     High  
cufflinks 12.13     High  

0 Strain