Gene : Glyma.09G093600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  936
Name:  ? Glyma.09G093600 Secondary Identifier:  ? PAC:30486222
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G093600 0.5kb upstream 0.5kb upstream 3554 true Chr09: 12938344-12941897 Glycine max
Glyma.09G093600 0.5kb upstream 0.5kb upstream 500 false Chr09: 12941398-12941897 Glycine max
Glyma.09G093600 0.5kb downstream 0.5kb downstream 3554 true Chr09: 12937844-12941397 Glycine max
Glyma.09G093600 0.5kb downstream 0.5kb downstream 500 false Chr09: 12937844-12938343 Glycine max
Glyma.09G093600 1.0kb upstream 1.0kb upstream 4054 true Chr09: 12938344-12942397 Glycine max
Glyma.09G093600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12941398-12942397 Glycine max
Glyma.09G093600 1.0kb downstream 1.0kb downstream 4054 true Chr09: 12937344-12941397 Glycine max
Glyma.09G093600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12937344-12938343 Glycine max
Glyma.09G093600 2.0kb upstream 2.0kb upstream 5054 true Chr09: 12938344-12943397 Glycine max
Glyma.09G093600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12941398-12943397 Glycine max
Glyma.09G093600 2.0kb downstream 2.0kb downstream 5054 true Chr09: 12936344-12941397 Glycine max
Glyma.09G093600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12936344-12938343 Glycine max
Glyma.09G093600 5.0kb upstream 5.0kb upstream 8054 true Chr09: 12938344-12946397 Glycine max
Glyma.09G093600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12941398-12946397 Glycine max
Glyma.09G093600 5.0kb downstream 5.0kb downstream 8054 true Chr09: 12933344-12941397 Glycine max
Glyma.09G093600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12933344-12938343 Glycine max
Glyma.09G093600 10.0kb upstream 10.0kb upstream 13054 true Chr09: 12938344-12951397 Glycine max
Glyma.09G093600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12941398-12951397 Glycine max
Glyma.09G093600 10.0kb downstream 10.0kb downstream 13054 true Chr09: 12928344-12941397 Glycine max
Glyma.09G093600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12928344-12938343 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312691 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0827734 0.0 0.337203 Low  
cufflinks 0.0398762 0.0 0.170324 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.7391 0.0 32.7788   High
cufflinks 4.52212 0.0 14.278    
cufflinks 0.0361896 0.0 0.155865 Low  
cufflinks 0.0594697 0.0 0.246278 Low  
cufflinks 4.04634 0.0 12.9529    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.396        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.841        
cufflinks 7.296     High  
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.954        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.88        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.471        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.513        

0 Strain