Gene : Glyma.09G097700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21136//PTHR21136:SF106 - SNARE PROTEINS Genomic Order:  977
Name:  ? Glyma.09G097700 Secondary Identifier:  ? PAC:30485251
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G097700 0.5kb upstream 0.5kb upstream 6137 true Chr09: 16057655-16063791 Glycine max
Glyma.09G097700 0.5kb upstream 0.5kb upstream 500 false Chr09: 16057655-16058154 Glycine max
Glyma.09G097700 0.5kb downstream 0.5kb downstream 6137 true Chr09: 16058155-16064291 Glycine max
Glyma.09G097700 0.5kb downstream 0.5kb downstream 500 false Chr09: 16063792-16064291 Glycine max
Glyma.09G097700 1.0kb upstream 1.0kb upstream 6637 true Chr09: 16057155-16063791 Glycine max
Glyma.09G097700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16057155-16058154 Glycine max
Glyma.09G097700 1.0kb downstream 1.0kb downstream 6637 true Chr09: 16058155-16064791 Glycine max
Glyma.09G097700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16063792-16064791 Glycine max
Glyma.09G097700 2.0kb upstream 2.0kb upstream 7637 true Chr09: 16056155-16063791 Glycine max
Glyma.09G097700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16056155-16058154 Glycine max
Glyma.09G097700 2.0kb downstream 2.0kb downstream 7637 true Chr09: 16058155-16065791 Glycine max
Glyma.09G097700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16063792-16065791 Glycine max
Glyma.09G097700 5.0kb upstream 5.0kb upstream 10637 true Chr09: 16053155-16063791 Glycine max
Glyma.09G097700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16053155-16058154 Glycine max
Glyma.09G097700 5.0kb downstream 5.0kb downstream 10637 true Chr09: 16058155-16068791 Glycine max
Glyma.09G097700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16063792-16068791 Glycine max
Glyma.09G097700 10.0kb upstream 10.0kb upstream 15637 true Chr09: 16048155-16063791 Glycine max
Glyma.09G097700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16048155-16058154 Glycine max
Glyma.09G097700 10.0kb downstream 10.0kb downstream 15637 true Chr09: 16058155-16073791 Glycine max
Glyma.09G097700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16063792-16073791 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242975 5265 Fabidae Singleton cluster - no MSA
124074521 5270 Rosid View MSA
123750725 5271 Pentapetalae View MSA
122788726 5272 Eudicot View MSA
122044882 5273 Angiosperm View MSA
121346186 5274 Embryophyte View MSA
123424680 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7435 0.0 82.049 High  
cufflinks 27.3981 0.0 73.2311 High  
cufflinks 45.4056 0.0 121.777 High  
cufflinks 32.1291 0.0 85.7189 High  
cufflinks 32.829 0.0 87.5836 High  
cufflinks 74.4028 0.0 205.595 High High
cufflinks 20.3244 0.0 54.8835   Low
cufflinks 46.4966 0.0 124.829 High  
cufflinks 38.5488 0.0 102.978 High  
cufflinks 7.815     High High
cufflinks 7.347     High  
cufflinks 5.656        
cufflinks 7.106        
cufflinks 5.815        
cufflinks 7.841     High High
cufflinks 5.502        
cufflinks 5.426        
cufflinks 5.404        
cufflinks 5.271        
cufflinks 5.656        
cufflinks 7.257     High  
cufflinks 5.603        
cufflinks 4.192       Low
cufflinks 7.634     High High
cufflinks 5.434        
cufflinks 7.269     High  

0 Strain