Gene : Glyma.09G098700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31713:SF11 - CALMODULIN-BINDING PROTEIN-RELATED Genomic Order:  987
Name:  ? Glyma.09G098700 Secondary Identifier:  ? PAC:30485375
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G098700 0.5kb upstream 0.5kb upstream 5127 true Chr09: 17310594-17315720 Glycine max
Glyma.09G098700 0.5kb upstream 0.5kb upstream 500 false Chr09: 17315221-17315720 Glycine max
Glyma.09G098700 0.5kb downstream 0.5kb downstream 5127 true Chr09: 17310094-17315220 Glycine max
Glyma.09G098700 0.5kb downstream 0.5kb downstream 500 false Chr09: 17310094-17310593 Glycine max
Glyma.09G098700 1.0kb upstream 1.0kb upstream 5627 true Chr09: 17310594-17316220 Glycine max
Glyma.09G098700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17315221-17316220 Glycine max
Glyma.09G098700 1.0kb downstream 1.0kb downstream 5627 true Chr09: 17309594-17315220 Glycine max
Glyma.09G098700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17309594-17310593 Glycine max
Glyma.09G098700 2.0kb upstream 2.0kb upstream 6627 true Chr09: 17310594-17317220 Glycine max
Glyma.09G098700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17315221-17317220 Glycine max
Glyma.09G098700 2.0kb downstream 2.0kb downstream 6627 true Chr09: 17308594-17315220 Glycine max
Glyma.09G098700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17308594-17310593 Glycine max
Glyma.09G098700 5.0kb upstream 5.0kb upstream 9627 true Chr09: 17310594-17320220 Glycine max
Glyma.09G098700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17315221-17320220 Glycine max
Glyma.09G098700 5.0kb downstream 5.0kb downstream 9627 true Chr09: 17305594-17315220 Glycine max
Glyma.09G098700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17305594-17310593 Glycine max
Glyma.09G098700 10.0kb upstream 10.0kb upstream 14627 true Chr09: 17310594-17325220 Glycine max
Glyma.09G098700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17315221-17325220 Glycine max
Glyma.09G098700 10.0kb downstream 10.0kb downstream 14627 true Chr09: 17300594-17315220 Glycine max
Glyma.09G098700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17300594-17310593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041199 5273 Angiosperm View MSA
122306149 5265 Fabidae View MSA
124068342 5270 Rosid View MSA
123753678 5271 Pentapetalae View MSA
122786667 5272 Eudicot View MSA
121350867 5274 Embryophyte View MSA
123381913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.6499 0.0 23.2218    
cufflinks 3.40339 0.0 11.5402    
cufflinks 4.8514 0.0 17.5215    
cufflinks 3.3741 0.0 11.3878    
cufflinks 8.79704 0.0 30.1915    
cufflinks 20.4213 0.0 74.6434   High
cufflinks 1.9658 0.0 7.83435   Low
cufflinks 8.93046 0.0 30.6585    
cufflinks 7.48483 0.0 25.8359    
cufflinks 3.851        
cufflinks 3.48        
cufflinks 1.979        
cufflinks 5.629       High
cufflinks 4.606       High
cufflinks 5.105       High
cufflinks 1.664        
cufflinks 5.365       High
cufflinks 1.037       Low
cufflinks 1.675        
cufflinks 1.352       Low
cufflinks 3.155        
cufflinks 1.298       Low
cufflinks 1.301       Low
cufflinks 2.795        
cufflinks 1.404        
cufflinks 4.344        

0 Strain