Gene : Glyma.09G085200 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  852
Name:  ? Glyma.09G085200 Secondary Identifier:  ? PAC:30486135
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G085200 0.5kb upstream 0.5kb upstream 5304 true Chr09: 10417777-10423080 Glycine max
Glyma.09G085200 0.5kb upstream 0.5kb upstream 500 false Chr09: 10417777-10418276 Glycine max
Glyma.09G085200 0.5kb downstream 0.5kb downstream 5304 true Chr09: 10418277-10423580 Glycine max
Glyma.09G085200 0.5kb downstream 0.5kb downstream 500 false Chr09: 10423081-10423580 Glycine max
Glyma.09G085200 1.0kb upstream 1.0kb upstream 5804 true Chr09: 10417277-10423080 Glycine max
Glyma.09G085200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10417277-10418276 Glycine max
Glyma.09G085200 1.0kb downstream 1.0kb downstream 5804 true Chr09: 10418277-10424080 Glycine max
Glyma.09G085200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10423081-10424080 Glycine max
Glyma.09G085200 2.0kb upstream 2.0kb upstream 6804 true Chr09: 10416277-10423080 Glycine max
Glyma.09G085200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10416277-10418276 Glycine max
Glyma.09G085200 2.0kb downstream 2.0kb downstream 6804 true Chr09: 10418277-10425080 Glycine max
Glyma.09G085200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10423081-10425080 Glycine max
Glyma.09G085200 5.0kb upstream 5.0kb upstream 9804 true Chr09: 10413277-10423080 Glycine max
Glyma.09G085200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10413277-10418276 Glycine max
Glyma.09G085200 5.0kb downstream 5.0kb downstream 9804 true Chr09: 10418277-10428080 Glycine max
Glyma.09G085200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10423081-10428080 Glycine max
Glyma.09G085200 10.0kb upstream 10.0kb upstream 14804 true Chr09: 10408277-10423080 Glycine max
Glyma.09G085200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10408277-10418276 Glycine max
Glyma.09G085200 10.0kb downstream 10.0kb downstream 14804 true Chr09: 10418277-10433080 Glycine max
Glyma.09G085200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10423081-10433080 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302625 5265 Fabidae View MSA
124066355 5270 Rosid View MSA
123740416 5271 Pentapetalae View MSA
122793114 5272 Eudicot View MSA
122046069 5273 Angiosperm View MSA
121347106 5274 Embryophyte View MSA
123380493 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.94258 0.0 16.0944    
cufflinks 9.55169 0.0 25.4891    
cufflinks 3.81709 0.0 10.6604   Low
cufflinks 8.4079 0.0 22.4723    
cufflinks 10.1187 0.0 26.9958    
cufflinks 8.41483 0.0 22.4877    
cufflinks 11.6958 0.0 31.2287   High
cufflinks 8.5317 0.0 22.7966    
cufflinks 9.09341 0.0 24.2741    
cufflinks 7.93     High  
cufflinks 2.916       Low
cufflinks 4.908        
cufflinks 8.548     High  
cufflinks 9.344     High  
cufflinks 2.145       Low
cufflinks 8.026     High  
cufflinks 2.478       Low
cufflinks 9.698     High  
cufflinks 8.317     High  
cufflinks 8.766     High  
cufflinks 4.941        
cufflinks 9.041     High  
cufflinks 9.023     High  
cufflinks 3.057       Low
cufflinks 7.746     High  
cufflinks 3.662        

0 Strain