Gene : Glyma.09G088300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED Genomic Order:  883
Name:  ? Glyma.09G088300 Secondary Identifier:  ? PAC:30486789
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G088300 0.5kb upstream 0.5kb upstream 15515 true Chr09: 11645049-11660563 Glycine max
Glyma.09G088300 0.5kb upstream 0.5kb upstream 500 false Chr09: 11660064-11660563 Glycine max
Glyma.09G088300 0.5kb downstream 0.5kb downstream 15515 true Chr09: 11644549-11660063 Glycine max
Glyma.09G088300 0.5kb downstream 0.5kb downstream 500 false Chr09: 11644549-11645048 Glycine max
Glyma.09G088300 1.0kb upstream 1.0kb upstream 16015 true Chr09: 11645049-11661063 Glycine max
Glyma.09G088300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 11660064-11661063 Glycine max
Glyma.09G088300 1.0kb downstream 1.0kb downstream 16015 true Chr09: 11644049-11660063 Glycine max
Glyma.09G088300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 11644049-11645048 Glycine max
Glyma.09G088300 2.0kb upstream 2.0kb upstream 17015 true Chr09: 11645049-11662063 Glycine max
Glyma.09G088300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 11660064-11662063 Glycine max
Glyma.09G088300 2.0kb downstream 2.0kb downstream 17015 true Chr09: 11643049-11660063 Glycine max
Glyma.09G088300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 11643049-11645048 Glycine max
Glyma.09G088300 5.0kb upstream 5.0kb upstream 20015 true Chr09: 11645049-11665063 Glycine max
Glyma.09G088300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 11660064-11665063 Glycine max
Glyma.09G088300 5.0kb downstream 5.0kb downstream 20015 true Chr09: 11640049-11660063 Glycine max
Glyma.09G088300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 11640049-11645048 Glycine max
Glyma.09G088300 10.0kb upstream 10.0kb upstream 25015 true Chr09: 11645049-11670063 Glycine max
Glyma.09G088300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 11660064-11670063 Glycine max
Glyma.09G088300 10.0kb downstream 10.0kb downstream 25015 true Chr09: 11635049-11660063 Glycine max
Glyma.09G088300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 11635049-11645048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308135 5265 Fabidae View MSA
124073218 5270 Rosid View MSA
123748033 5271 Pentapetalae View MSA
122786576 5272 Eudicot View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.1326 0.0 39.1141   High
cufflinks 5.64523 0.0 26.1135    
cufflinks 7.80437 0.0 34.5329    
cufflinks 5.42259 0.0 33.6276    
cufflinks 5.66193 0.0 26.5192    
cufflinks 8.56486 0.0 37.6328   High
cufflinks 4.60759 0.0 27.9563   Low
cufflinks 5.10159 0.0 26.7906    
cufflinks 6.33436 0.0 33.858    
cufflinks 0.386        
cufflinks 0.356        
cufflinks 0.356        
cufflinks 0.206       Low
cufflinks 0.18       Low
cufflinks 0.876       High
cufflinks 0.302        
cufflinks 0.393        
cufflinks 0.453        
cufflinks 0.293        
cufflinks 0.286        
cufflinks 0.322        
cufflinks 0.298        
cufflinks 0.343        
cufflinks 0.385        
cufflinks 0.323        
cufflinks 0.388        

0 Strain