Protein Family : NLI interacting factor-like phosphatase, putative, expressed 123429149

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  415

415 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
5881 (1 of 51) PTHR12210 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED S. moellendorffii v1.0 378   scaffold_13: 2397021-2397398
7432 (1 of 51) PTHR12210 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED S. moellendorffii v1.0 246   scaffold_13: 2421080-2421325
424529 (1 of 1) PF01885//PF03031 - RNA 2'-phosphotransferase, Tpt1 / KptA family (PTS_2-RNA) // NLI interacting factor-like phosphatase (NIF) S. moellendorffii v1.0 1421   scaffold_68: 292407-293827
29693.t000113 (1 of 1) PTHR12210//PTHR12210:SF71 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SCP1-LIKE SMALL PHOSPHATASE 4-RELATED R. communis v0.1 3502   29693: 767744-771245
29701.t000004 (1 of 3) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) R. communis v0.1 4355   29701: 14702-19056
29929.t000158 (1 of 1) K17616 - CTD small phosphatase-like protein 2 [EC:3.1.3.-] (CTDSPL2) R. communis v0.1 3458   29929: 949664-953121
30026.t000051 (1 of 3) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) R. communis v0.1 903   30026: 376251-377153
Cucsa.368550 (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN C. sativus v1.0 3161   scaffold03639: 333987-337147
Cucsa.047190 (1 of 9) PTHR12210 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED C. sativus v1.0 813   scaffold00542: 2323805-2324617
Cucsa.047440 (1 of 1) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED C. sativus v1.0 9108   scaffold00542: 2460150-2469257
Cucsa.176380 (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN C. sativus v1.0 2330   scaffold01225: 654253-656582
orange1.1g044274m.g (1 of 13) PTHR12210 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED C. sinensis v1.1 879   scaffold00007: 1025470-1026348
orange1.1g022258m.g (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN C. sinensis v1.1 3285   scaffold00021: 482531-485815
orange1.1g020937m.g (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN C. sinensis v1.1 4060   scaffold00098: 59623-63682
orange1.1g015573m.g (1 of 1) PTHR12210:SF13 - CTD SMALL PHOSPHATASE-LIKE PROTEIN 2 C. sinensis v1.1 5275   scaffold00003: 445288-450562
orange1.1g011867m.g (1 of 3) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED C. sinensis v1.1 5483   scaffold00135: 178513-183995
AT4G18140 (1 of 2) PTHR12210//PTHR12210:SF71 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SCP1-LIKE SMALL PHOSPHATASE 4-RELATED A. thaliana TAIR10 SSP4b 2864   Chr4: 10046575-10049438
AT5G11860 (1 of 1) K17616 - CTD small phosphatase-like protein 2 [EC:3.1.3.-] (CTDSPL2) A. thaliana TAIR10 SSP5 2473   Chr5: 3821803-3824275
AT5G45700 (1 of 4) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) A. thaliana TAIR10 848   Chr5: 18537349-18538196
AT5G46410 (1 of 2) PTHR12210//PTHR12210:SF71 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SCP1-LIKE SMALL PHOSPHATASE 4-RELATED A. thaliana TAIR10 SSP4 4119   Chr5: 18825103-18829221
AT3G55960 (1 of 1) PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN A. thaliana TAIR10 2577   Chr3: 20760457-20763033
AT1G29780 (1 of 4) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) A. thaliana TAIR10 666   Chr1: 10426950-10427615
AT1G29770 (1 of 4) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) A. thaliana TAIR10 1226   Chr1: 10424576-10425801
Thhalv10016941m.g (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN E. salsugineum v1.0 2267   scaffold_10: 10609961-10612227
Thhalv10006119m.g (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN E. salsugineum v1.0 2691   scaffold_19: 2753327-2756017
Thhalv10014204m.g (1 of 1) PTHR12210:SF13 - CTD SMALL PHOSPHATASE-LIKE PROTEIN 2 E. salsugineum v1.0 2831   scaffold_2: 3890665-3893495
Thhalv10000883m.g (1 of 1) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED E. salsugineum v1.0 3768   scaffold_20: 1808227-1811994
Thhalv10000984m.g (1 of 9) KOG1605 - TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) E. salsugineum v1.0 1012   scaffold_20: 1343978-1344989
Thhalv10009586m.g (1 of 9) KOG1605 - TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) E. salsugineum v1.0 861   scaffold_5: 4890134-4890994
Thhalv10009741m.g (1 of 9) KOG1605 - TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) E. salsugineum v1.0 675   scaffold_5: 4888178-4888852

415 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
7432 S. moellendorffii v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
424529 S. moellendorffii v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
5881 S. moellendorffii v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae
29701.m000583 R. communis v0.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
30026.m001487 R. communis v0.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Cucsa.176380.1 C. sativus v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
Cucsa.368550.1 C. sativus v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 4 5275 Viridiplantae
orange1.1g015573m C. sinensis v1.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 5 5275 Viridiplantae
AT1G29770.1 A. thaliana TAIR10 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
AT5G11860.1 A. thaliana TAIR10 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
AT5G46410.2 A. thaliana TAIR10 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
Ciclev10001022m C. clementina v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 6 5275 Viridiplantae
Ciclev10012210m C. clementina v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 6 5275 Viridiplantae
Ciclev10031856m C. clementina v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 6 5275 Viridiplantae
Ciclev10031713m C. clementina v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 6 5275 Viridiplantae
Lus10004596 L. usitatissimum v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 9 5275 Viridiplantae
Lus10014844 L. usitatissimum v1.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 9 5275 Viridiplantae
Gorai.010G161900.1 G. raimondii v2.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 12 5275 Viridiplantae
Gorai.010G162100.1 G. raimondii v2.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 12 5275 Viridiplantae
Gorai.002G183900.1 G. raimondii v2.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 12 5275 Viridiplantae
Gorai.011G288400.1 G. raimondii v2.1 123429149 NLI interacting factor-like phosphatase, putative, expressed 12 5275 Viridiplantae
158014 M. pusilla CCMP1545 v3.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
63263 C. subellipsoidea C-169 v2.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
30404 C. subellipsoidea C-169 v2.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
53134 C. subellipsoidea C-169 v2.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
43960 C. subellipsoidea C-169 v2.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
67358 C. subellipsoidea C-169 v2.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 7 5275 Viridiplantae
71468 M. sp RCC299 v3.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
92195 M. sp RCC299 v3.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 2 5275 Viridiplantae
8327 O. lucimarinus v2.0 123429149 NLI interacting factor-like phosphatase, putative, expressed 3 5275 Viridiplantae