Gene : Glyma.09G129600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31399:SF0 - DNA-DIRECTED PRIMASE/POLYMERASE PROTEIN Genomic Order:  1296
Name:  ? Glyma.09G129600 Secondary Identifier:  ? PAC:30485743
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G129600 0.5kb upstream 0.5kb upstream 10977 true Chr09: 32420778-32431754 Glycine max
Glyma.09G129600 0.5kb upstream 0.5kb upstream 500 false Chr09: 32431255-32431754 Glycine max
Glyma.09G129600 0.5kb downstream 0.5kb downstream 10977 true Chr09: 32420278-32431254 Glycine max
Glyma.09G129600 0.5kb downstream 0.5kb downstream 500 false Chr09: 32420278-32420777 Glycine max
Glyma.09G129600 1.0kb upstream 1.0kb upstream 11477 true Chr09: 32420778-32432254 Glycine max
Glyma.09G129600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32431255-32432254 Glycine max
Glyma.09G129600 1.0kb downstream 1.0kb downstream 11477 true Chr09: 32419778-32431254 Glycine max
Glyma.09G129600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32419778-32420777 Glycine max
Glyma.09G129600 2.0kb upstream 2.0kb upstream 12477 true Chr09: 32420778-32433254 Glycine max
Glyma.09G129600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32431255-32433254 Glycine max
Glyma.09G129600 2.0kb downstream 2.0kb downstream 12477 true Chr09: 32418778-32431254 Glycine max
Glyma.09G129600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32418778-32420777 Glycine max
Glyma.09G129600 5.0kb upstream 5.0kb upstream 15477 true Chr09: 32420778-32436254 Glycine max
Glyma.09G129600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32431255-32436254 Glycine max
Glyma.09G129600 5.0kb downstream 5.0kb downstream 15477 true Chr09: 32415778-32431254 Glycine max
Glyma.09G129600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32415778-32420777 Glycine max
Glyma.09G129600 10.0kb upstream 10.0kb upstream 20477 true Chr09: 32420778-32441254 Glycine max
Glyma.09G129600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32431255-32441254 Glycine max
Glyma.09G129600 10.0kb downstream 10.0kb downstream 20477 true Chr09: 32410778-32431254 Glycine max
Glyma.09G129600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32410778-32420777 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040891 5273 Angiosperm View MSA
122300475 5265 Fabidae View MSA
124065964 5270 Rosid View MSA
123740787 5271 Pentapetalae View MSA
122790356 5272 Eudicot View MSA
121345588 5274 Embryophyte View MSA
123427988 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.01631 0.0 12.7167    
cufflinks 5.04592 0.0 18.6   High
cufflinks 5.71314 0.0 20.5022   High
cufflinks 3.46065 0.0 13.9146    
cufflinks 3.77883 0.0 17.4776    
cufflinks 2.74199 0.0 10.1443   Low
cufflinks 3.17461 0.0 13.2844    
cufflinks 3.08272 0.0 11.0252    
cufflinks 4.16957 0.0 15.9595    
cufflinks 0.373        
cufflinks 0.337        
cufflinks 0.91       High
cufflinks 0.492        
cufflinks 0.577        
cufflinks 0.262       Low
cufflinks 0.495        
cufflinks 0.272       Low
cufflinks 1.0       High
cufflinks 0.851       High
cufflinks 0.459        
cufflinks 0.29       Low
cufflinks 0.534        
cufflinks 0.63        
cufflinks 0.389        
cufflinks 0.465        
cufflinks 0.317        

0 Strain