Gene : Glyma.09G130600 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  1306
Name:  ? Glyma.09G130600 Secondary Identifier:  ? PAC:30487031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G130600 0.5kb upstream 0.5kb upstream 1172 true Chr09: 32554691-32555862 Glycine max
Glyma.09G130600 0.5kb upstream 0.5kb upstream 500 false Chr09: 32555363-32555862 Glycine max
Glyma.09G130600 0.5kb downstream 0.5kb downstream 1172 true Chr09: 32554191-32555362 Glycine max
Glyma.09G130600 0.5kb downstream 0.5kb downstream 500 false Chr09: 32554191-32554690 Glycine max
Glyma.09G130600 1.0kb upstream 1.0kb upstream 1672 true Chr09: 32554691-32556362 Glycine max
Glyma.09G130600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32555363-32556362 Glycine max
Glyma.09G130600 1.0kb downstream 1.0kb downstream 1672 true Chr09: 32553691-32555362 Glycine max
Glyma.09G130600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32553691-32554690 Glycine max
Glyma.09G130600 2.0kb upstream 2.0kb upstream 2672 true Chr09: 32554691-32557362 Glycine max
Glyma.09G130600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32555363-32557362 Glycine max
Glyma.09G130600 2.0kb downstream 2.0kb downstream 2672 true Chr09: 32552691-32555362 Glycine max
Glyma.09G130600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32552691-32554690 Glycine max
Glyma.09G130600 5.0kb upstream 5.0kb upstream 5672 true Chr09: 32554691-32560362 Glycine max
Glyma.09G130600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32555363-32560362 Glycine max
Glyma.09G130600 5.0kb downstream 5.0kb downstream 5672 true Chr09: 32549691-32555362 Glycine max
Glyma.09G130600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32549691-32554690 Glycine max
Glyma.09G130600 10.0kb upstream 10.0kb upstream 10672 true Chr09: 32554691-32565362 Glycine max
Glyma.09G130600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32555363-32565362 Glycine max
Glyma.09G130600 10.0kb downstream 10.0kb downstream 10672 true Chr09: 32544691-32555362 Glycine max
Glyma.09G130600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32544691-32554690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298597 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.173       High
cufflinks 0.056        
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low  
cufflinks 0.133       High
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.023     Low Low
cufflinks 0.027     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain