Gene : Glyma.09G131400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12802:SF49 - PROTEIN REVEILLE 3-RELATED Genomic Order:  1314
Name:  ? Glyma.09G131400 Secondary Identifier:  ? PAC:30486254
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G131400 0.5kb upstream 0.5kb upstream 8413 true Chr09: 32745511-32753923 Glycine max
Glyma.09G131400 0.5kb upstream 0.5kb upstream 500 false Chr09: 32745511-32746010 Glycine max
Glyma.09G131400 0.5kb downstream 0.5kb downstream 8413 true Chr09: 32746011-32754423 Glycine max
Glyma.09G131400 0.5kb downstream 0.5kb downstream 500 false Chr09: 32753924-32754423 Glycine max
Glyma.09G131400 1.0kb upstream 1.0kb upstream 8913 true Chr09: 32745011-32753923 Glycine max
Glyma.09G131400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32745011-32746010 Glycine max
Glyma.09G131400 1.0kb downstream 1.0kb downstream 8913 true Chr09: 32746011-32754923 Glycine max
Glyma.09G131400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32753924-32754923 Glycine max
Glyma.09G131400 2.0kb upstream 2.0kb upstream 9913 true Chr09: 32744011-32753923 Glycine max
Glyma.09G131400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32744011-32746010 Glycine max
Glyma.09G131400 2.0kb downstream 2.0kb downstream 9913 true Chr09: 32746011-32755923 Glycine max
Glyma.09G131400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32753924-32755923 Glycine max
Glyma.09G131400 5.0kb upstream 5.0kb upstream 12913 true Chr09: 32741011-32753923 Glycine max
Glyma.09G131400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32741011-32746010 Glycine max
Glyma.09G131400 5.0kb downstream 5.0kb downstream 12913 true Chr09: 32746011-32758923 Glycine max
Glyma.09G131400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32753924-32758923 Glycine max
Glyma.09G131400 10.0kb upstream 10.0kb upstream 17913 true Chr09: 32736011-32753923 Glycine max
Glyma.09G131400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32736011-32746010 Glycine max
Glyma.09G131400 10.0kb downstream 10.0kb downstream 17913 true Chr09: 32746011-32763923 Glycine max
Glyma.09G131400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32753924-32763923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298993 5265 Fabidae View MSA
124066393 5270 Rosid View MSA
123747099 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.22141 0.0 19.6358    
cufflinks 3.70733 0.0 11.9677    
cufflinks 7.62097 0.0 25.7938   High
cufflinks 5.17941 0.0 19.3939    
cufflinks 3.41703 0.0 11.3556   Low
cufflinks 4.93466 0.0 18.8068    
cufflinks 4.05949 0.0 20.4277    
cufflinks 7.31593 0.0 24.9763   High
cufflinks 3.9093 0.0 19.9973    
cufflinks 0.321       Low
cufflinks 0.702       High
cufflinks 0.632        
cufflinks 0.351       Low
cufflinks 0.322       Low
cufflinks 0.72       High
cufflinks 0.592        
cufflinks 0.41        
cufflinks 0.52        
cufflinks 0.425        
cufflinks 0.593        
cufflinks 0.584        
cufflinks 0.501        
cufflinks 0.486        
cufflinks 0.706       High
cufflinks 0.505        
cufflinks 0.656        

0 Strain