Gene : Glyma.09G117100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23180:SF268 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  1171
Name:  ? Glyma.09G117100 Secondary Identifier:  ? PAC:30484382
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G117100 0.5kb upstream 0.5kb upstream 9933 true Chr09: 27230668-27240600 Glycine max
Glyma.09G117100 0.5kb upstream 0.5kb upstream 500 false Chr09: 27230668-27231167 Glycine max
Glyma.09G117100 0.5kb downstream 0.5kb downstream 9933 true Chr09: 27231168-27241100 Glycine max
Glyma.09G117100 0.5kb downstream 0.5kb downstream 500 false Chr09: 27240601-27241100 Glycine max
Glyma.09G117100 1.0kb upstream 1.0kb upstream 10433 true Chr09: 27230168-27240600 Glycine max
Glyma.09G117100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27230168-27231167 Glycine max
Glyma.09G117100 1.0kb downstream 1.0kb downstream 10433 true Chr09: 27231168-27241600 Glycine max
Glyma.09G117100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27240601-27241600 Glycine max
Glyma.09G117100 2.0kb upstream 2.0kb upstream 11433 true Chr09: 27229168-27240600 Glycine max
Glyma.09G117100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27229168-27231167 Glycine max
Glyma.09G117100 2.0kb downstream 2.0kb downstream 11433 true Chr09: 27231168-27242600 Glycine max
Glyma.09G117100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27240601-27242600 Glycine max
Glyma.09G117100 5.0kb upstream 5.0kb upstream 14433 true Chr09: 27226168-27240600 Glycine max
Glyma.09G117100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27226168-27231167 Glycine max
Glyma.09G117100 5.0kb downstream 5.0kb downstream 14433 true Chr09: 27231168-27245600 Glycine max
Glyma.09G117100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27240601-27245600 Glycine max
Glyma.09G117100 10.0kb upstream 10.0kb upstream 19433 true Chr09: 27221168-27240600 Glycine max
Glyma.09G117100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27221168-27231167 Glycine max
Glyma.09G117100 10.0kb downstream 10.0kb downstream 19433 true Chr09: 27231168-27250600 Glycine max
Glyma.09G117100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27240601-27250600 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301870 5265 Fabidae View MSA
124073070 5270 Rosid View MSA
123750672 5271 Pentapetalae View MSA
122773790 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.1576 0.0 137.903 High High
cufflinks 17.5813 0.0 60.9542    
cufflinks 35.4402 0.0 124.502 High  
cufflinks 25.9851 0.0 86.6365 High  
cufflinks 9.89227 0.0 39.0909   Low
cufflinks 21.1822 0.0 77.3885    
cufflinks 39.4542 0.0 144.402 High High
cufflinks 23.7881 0.0 84.3062 High  
cufflinks 10.5092 0.0 40.5901   Low
cufflinks 1.803       High
cufflinks 0.555        
cufflinks 1.22        
cufflinks 0.184       Low
cufflinks 0.209       Low
cufflinks 0.392       Low
cufflinks 0.934        
cufflinks 1.894       High
cufflinks 1.308        
cufflinks 0.846        
cufflinks 0.73        
cufflinks 0.661        
cufflinks 0.842        
cufflinks 1.418        
cufflinks 1.027        
cufflinks 0.814        
cufflinks 1.751       High

0 Strain