Gene : Glyma.09G171900 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  1719
Name:  ? Glyma.09G171900 Secondary Identifier:  ? PAC:30483229
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G171900 0.5kb upstream 0.5kb upstream 4335 true Chr09: 39656849-39661183 Glycine max
Glyma.09G171900 0.5kb upstream 0.5kb upstream 500 false Chr09: 39660684-39661183 Glycine max
Glyma.09G171900 0.5kb downstream 0.5kb downstream 4335 true Chr09: 39656349-39660683 Glycine max
Glyma.09G171900 0.5kb downstream 0.5kb downstream 500 false Chr09: 39656349-39656848 Glycine max
Glyma.09G171900 1.0kb upstream 1.0kb upstream 4835 true Chr09: 39656849-39661683 Glycine max
Glyma.09G171900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39660684-39661683 Glycine max
Glyma.09G171900 1.0kb downstream 1.0kb downstream 4835 true Chr09: 39655849-39660683 Glycine max
Glyma.09G171900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39655849-39656848 Glycine max
Glyma.09G171900 2.0kb upstream 2.0kb upstream 5835 true Chr09: 39656849-39662683 Glycine max
Glyma.09G171900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39660684-39662683 Glycine max
Glyma.09G171900 2.0kb downstream 2.0kb downstream 5835 true Chr09: 39654849-39660683 Glycine max
Glyma.09G171900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39654849-39656848 Glycine max
Glyma.09G171900 5.0kb upstream 5.0kb upstream 8835 true Chr09: 39656849-39665683 Glycine max
Glyma.09G171900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39660684-39665683 Glycine max
Glyma.09G171900 5.0kb downstream 5.0kb downstream 8835 true Chr09: 39651849-39660683 Glycine max
Glyma.09G171900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39651849-39656848 Glycine max
Glyma.09G171900 10.0kb upstream 10.0kb upstream 13835 true Chr09: 39656849-39670683 Glycine max
Glyma.09G171900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39660684-39670683 Glycine max
Glyma.09G171900 10.0kb downstream 10.0kb downstream 13835 true Chr09: 39646849-39660683 Glycine max
Glyma.09G171900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39646849-39656848 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299022 5265 Fabidae View MSA
124062530 5270 Rosid View MSA
123743837 5271 Pentapetalae View MSA
122792166 5272 Eudicot View MSA
122045353 5273 Angiosperm View MSA
121310438 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9222 0.0 57.2162   High
cufflinks 10.7103 0.0 42.2135    
cufflinks 11.8237 0.0 41.0054    
cufflinks 7.8283 0.0 28.6105    
cufflinks 7.5325 0.0 28.249    
cufflinks 11.063 0.0 38.7253    
cufflinks 7.33479 0.0 27.5068    
cufflinks 6.73081 0.0 25.3281    
cufflinks 6.49591 0.0 24.8119   Low
cufflinks 1.336        
cufflinks 2.0        
cufflinks 2.326        
cufflinks 1.141       Low
cufflinks 1.092       Low
cufflinks 1.86        
cufflinks 2.618        
cufflinks 0.828       Low
cufflinks 1.958        
cufflinks 1.924        
cufflinks 2.88       High
cufflinks 1.513        
cufflinks 2.773       High
cufflinks 2.802       High
cufflinks 2.041        
cufflinks 2.894       High
cufflinks 0.985       Low

0 Strain