Gene : Glyma.09G172100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN Genomic Order:  1721
Name:  ? Glyma.09G172100 Secondary Identifier:  ? PAC:30486140
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G172100 0.5kb upstream 0.5kb upstream 2227 true Chr09: 39684547-39686773 Glycine max
Glyma.09G172100 0.5kb upstream 0.5kb upstream 500 false Chr09: 39684547-39685046 Glycine max
Glyma.09G172100 0.5kb downstream 0.5kb downstream 2227 true Chr09: 39685047-39687273 Glycine max
Glyma.09G172100 0.5kb downstream 0.5kb downstream 500 false Chr09: 39686774-39687273 Glycine max
Glyma.09G172100 1.0kb upstream 1.0kb upstream 2727 true Chr09: 39684047-39686773 Glycine max
Glyma.09G172100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39684047-39685046 Glycine max
Glyma.09G172100 1.0kb downstream 1.0kb downstream 2727 true Chr09: 39685047-39687773 Glycine max
Glyma.09G172100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39686774-39687773 Glycine max
Glyma.09G172100 2.0kb upstream 2.0kb upstream 3727 true Chr09: 39683047-39686773 Glycine max
Glyma.09G172100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39683047-39685046 Glycine max
Glyma.09G172100 2.0kb downstream 2.0kb downstream 3727 true Chr09: 39685047-39688773 Glycine max
Glyma.09G172100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39686774-39688773 Glycine max
Glyma.09G172100 5.0kb upstream 5.0kb upstream 6727 true Chr09: 39680047-39686773 Glycine max
Glyma.09G172100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39680047-39685046 Glycine max
Glyma.09G172100 5.0kb downstream 5.0kb downstream 6727 true Chr09: 39685047-39691773 Glycine max
Glyma.09G172100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39686774-39691773 Glycine max
Glyma.09G172100 10.0kb upstream 10.0kb upstream 11727 true Chr09: 39675047-39686773 Glycine max
Glyma.09G172100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39675047-39685046 Glycine max
Glyma.09G172100 10.0kb downstream 10.0kb downstream 11727 true Chr09: 39685047-39696773 Glycine max
Glyma.09G172100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39686774-39696773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304332 5265 Fabidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76987 0.0 13.7964   High
cufflinks 0.181355 0.0 0.700346 Low  
cufflinks 0.473156 0.0 1.74527    
cufflinks 0.18094 0.0 0.698256    
cufflinks 0.415243 0.0 1.54573    
cufflinks 0.815158 0.0 2.9152    
cufflinks 0.0302381 0.0 0.126262 Low Low
cufflinks 0.427411 0.0 1.58572    
cufflinks 0.921562 0.0 3.26451    
cufflinks 6.87        
cufflinks 39.422     High High
cufflinks 4.385        
cufflinks 1.654        
cufflinks 0.19       Low
cufflinks 2.955        
cufflinks 0.292        
cufflinks 147.979     High High
cufflinks 2.072        
cufflinks 0.547        
cufflinks 0.142       Low
cufflinks 19.967     High  
cufflinks 0.258       Low
cufflinks 0.611        
cufflinks 43.67     High High
cufflinks 0.149       Low
cufflinks 35.041     High High

0 Strain