Gene : Glyma.09G173500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23222 - PROHIBITIN Genomic Order:  1735
Name:  ? Glyma.09G173500 Secondary Identifier:  ? PAC:30483670
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G173500 0.5kb upstream 0.5kb upstream 3979 true Chr09: 39831086-39835064 Glycine max
Glyma.09G173500 0.5kb upstream 0.5kb upstream 500 false Chr09: 39834565-39835064 Glycine max
Glyma.09G173500 0.5kb downstream 0.5kb downstream 3979 true Chr09: 39830586-39834564 Glycine max
Glyma.09G173500 0.5kb downstream 0.5kb downstream 500 false Chr09: 39830586-39831085 Glycine max
Glyma.09G173500 1.0kb upstream 1.0kb upstream 4479 true Chr09: 39831086-39835564 Glycine max
Glyma.09G173500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 39834565-39835564 Glycine max
Glyma.09G173500 1.0kb downstream 1.0kb downstream 4479 true Chr09: 39830086-39834564 Glycine max
Glyma.09G173500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 39830086-39831085 Glycine max
Glyma.09G173500 2.0kb upstream 2.0kb upstream 5479 true Chr09: 39831086-39836564 Glycine max
Glyma.09G173500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 39834565-39836564 Glycine max
Glyma.09G173500 2.0kb downstream 2.0kb downstream 5479 true Chr09: 39829086-39834564 Glycine max
Glyma.09G173500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 39829086-39831085 Glycine max
Glyma.09G173500 5.0kb upstream 5.0kb upstream 8479 true Chr09: 39831086-39839564 Glycine max
Glyma.09G173500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 39834565-39839564 Glycine max
Glyma.09G173500 5.0kb downstream 5.0kb downstream 8479 true Chr09: 39826086-39834564 Glycine max
Glyma.09G173500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 39826086-39831085 Glycine max
Glyma.09G173500 10.0kb upstream 10.0kb upstream 13479 true Chr09: 39831086-39844564 Glycine max
Glyma.09G173500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 39834565-39844564 Glycine max
Glyma.09G173500 10.0kb downstream 10.0kb downstream 13479 true Chr09: 39821086-39834564 Glycine max
Glyma.09G173500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 39821086-39831085 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310745 5265 Fabidae View MSA
124065127 5270 Rosid View MSA
123749728 5271 Pentapetalae View MSA
122788534 5272 Eudicot View MSA
122042382 5273 Angiosperm View MSA
121346311 5274 Embryophyte View MSA
123424137 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.5034 0.0 85.2831 High  
cufflinks 17.7291 0.0 53.4802    
cufflinks 6.88643 0.0 24.2908   Low
cufflinks 15.7171 0.0 47.8893    
cufflinks 32.1954 0.0 96.8941 High High
cufflinks 25.4753 0.0 75.6866 High  
cufflinks 18.6251 0.0 55.9678    
cufflinks 16.7719 0.0 50.5437    
cufflinks 27.3286 0.0 81.6138 High  
cufflinks 5.333        
cufflinks 2.178        
cufflinks 5.633        
cufflinks 17.417     High High
cufflinks 24.475     High High
cufflinks 1.532       Low
cufflinks 4.033        
cufflinks 2.879        
cufflinks 5.707        
cufflinks 7.528     High  
cufflinks 1.941       Low
cufflinks 2.879        
cufflinks 2.772        
cufflinks 4.025        
cufflinks 2.383        
cufflinks 2.968        
cufflinks 4.291        

0 Strain