Gene : Glyma.09G176900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23180:SF290 - C2 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1769
Name:  ? Glyma.09G176900 Secondary Identifier:  ? PAC:30483400
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G176900 0.5kb upstream 0.5kb upstream 2656 true Chr09: 40124170-40126825 Glycine max
Glyma.09G176900 0.5kb upstream 0.5kb upstream 500 false Chr09: 40126326-40126825 Glycine max
Glyma.09G176900 0.5kb downstream 0.5kb downstream 2656 true Chr09: 40123670-40126325 Glycine max
Glyma.09G176900 0.5kb downstream 0.5kb downstream 500 false Chr09: 40123670-40124169 Glycine max
Glyma.09G176900 1.0kb upstream 1.0kb upstream 3156 true Chr09: 40124170-40127325 Glycine max
Glyma.09G176900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40126326-40127325 Glycine max
Glyma.09G176900 1.0kb downstream 1.0kb downstream 3156 true Chr09: 40123170-40126325 Glycine max
Glyma.09G176900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40123170-40124169 Glycine max
Glyma.09G176900 2.0kb upstream 2.0kb upstream 4156 true Chr09: 40124170-40128325 Glycine max
Glyma.09G176900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40126326-40128325 Glycine max
Glyma.09G176900 2.0kb downstream 2.0kb downstream 4156 true Chr09: 40122170-40126325 Glycine max
Glyma.09G176900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40122170-40124169 Glycine max
Glyma.09G176900 5.0kb upstream 5.0kb upstream 7156 true Chr09: 40124170-40131325 Glycine max
Glyma.09G176900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40126326-40131325 Glycine max
Glyma.09G176900 5.0kb downstream 5.0kb downstream 7156 true Chr09: 40119170-40126325 Glycine max
Glyma.09G176900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40119170-40124169 Glycine max
Glyma.09G176900 10.0kb upstream 10.0kb upstream 12156 true Chr09: 40124170-40136325 Glycine max
Glyma.09G176900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40126326-40136325 Glycine max
Glyma.09G176900 10.0kb downstream 10.0kb downstream 12156 true Chr09: 40114170-40126325 Glycine max
Glyma.09G176900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40114170-40124169 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311894 5265 Fabidae View MSA
124069795 5270 Rosid View MSA
123747243 5271 Pentapetalae View MSA
122796022 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.493 0.0 109.995 High  
cufflinks 15.6361 0.0 76.3762    
cufflinks 17.0688 0.0 80.7215    
cufflinks 10.1429 0.0 55.1813   Low
cufflinks 28.1126 0.0 125.397 High  
cufflinks 45.1881 0.0 173.391 High High
cufflinks 40.8723 0.0 181.292 High High
cufflinks 18.5552 0.0 80.2752    
cufflinks 36.7977 0.0 160.932 High  
cufflinks 0.849        
cufflinks 2.1        
cufflinks 1.27        
cufflinks 1.47        
cufflinks 1.3        
cufflinks 6.69     High High
cufflinks 0.856        
cufflinks 1.131        
cufflinks 1.29        
cufflinks 0.91        
cufflinks 0.903        
cufflinks 2.148        
cufflinks 0.974        
cufflinks 0.798        
cufflinks 1.908        
cufflinks 0.867        
cufflinks 1.623        

0 Strain