Gene : Glyma.09G156600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11760//PTHR11760:SF22 - 30S/40S RIBOSOMAL PROTEIN S3 Genomic Order:  1566
Name:  ? Glyma.09G156600 Secondary Identifier:  ? PAC:30484295
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G156600 0.5kb upstream 0.5kb upstream 8142 true Chr09: 37986469-37994610 Glycine max
Glyma.09G156600 0.5kb upstream 0.5kb upstream 500 false Chr09: 37986469-37986968 Glycine max
Glyma.09G156600 0.5kb downstream 0.5kb downstream 8142 true Chr09: 37986969-37995110 Glycine max
Glyma.09G156600 0.5kb downstream 0.5kb downstream 500 false Chr09: 37994611-37995110 Glycine max
Glyma.09G156600 1.0kb upstream 1.0kb upstream 8642 true Chr09: 37985969-37994610 Glycine max
Glyma.09G156600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37985969-37986968 Glycine max
Glyma.09G156600 1.0kb downstream 1.0kb downstream 8642 true Chr09: 37986969-37995610 Glycine max
Glyma.09G156600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37994611-37995610 Glycine max
Glyma.09G156600 2.0kb upstream 2.0kb upstream 9642 true Chr09: 37984969-37994610 Glycine max
Glyma.09G156600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37984969-37986968 Glycine max
Glyma.09G156600 2.0kb downstream 2.0kb downstream 9642 true Chr09: 37986969-37996610 Glycine max
Glyma.09G156600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37994611-37996610 Glycine max
Glyma.09G156600 5.0kb upstream 5.0kb upstream 12642 true Chr09: 37981969-37994610 Glycine max
Glyma.09G156600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37981969-37986968 Glycine max
Glyma.09G156600 5.0kb downstream 5.0kb downstream 12642 true Chr09: 37986969-37999610 Glycine max
Glyma.09G156600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37994611-37999610 Glycine max
Glyma.09G156600 10.0kb upstream 10.0kb upstream 17642 true Chr09: 37976969-37994610 Glycine max
Glyma.09G156600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37976969-37986968 Glycine max
Glyma.09G156600 10.0kb downstream 10.0kb downstream 17642 true Chr09: 37986969-38004610 Glycine max
Glyma.09G156600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37994611-38004610 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313356 5265 Fabidae View MSA
124071878 5270 Rosid View MSA
123743530 5271 Pentapetalae View MSA
122790634 5272 Eudicot View MSA
122043820 5273 Angiosperm View MSA
121347963 5274 Embryophyte View MSA
123426422 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.8734 0.0 206.039 High  
cufflinks 63.9877 0.0 203.809 High  
cufflinks 35.3949 0.0 105.884 High Low
cufflinks 45.1389 0.0 158.114 High Low
cufflinks 117.64 0.0 443.28 High High
cufflinks 112.468 0.0 414.767 High High
cufflinks 78.6853 0.0 305.02 High  
cufflinks 75.0084 0.0 247.675 High  
cufflinks 78.3939 0.0 261.54 High  
cufflinks 6.292        
cufflinks 3.759       Low
cufflinks 3.999        
cufflinks 13.669     High High
cufflinks 19.557     High High
cufflinks 4.214        
cufflinks 5.898        
cufflinks 5.381        
cufflinks 4.546        
cufflinks 5.876        
cufflinks 4.701        
cufflinks 5.399        
cufflinks 4.553        
cufflinks 6.392        
cufflinks 4.536        
cufflinks 5.508        
cufflinks 5.457        

0 Strain