Gene : Glyma.09G158200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11353:SF63 - T-COMPLEX PROTEIN 1 SUBUNIT GAMMA Genomic Order:  1582
Name:  ? Glyma.09G158200 Secondary Identifier:  ? PAC:30484293
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G158200 0.5kb upstream 0.5kb upstream 6535 true Chr09: 38145581-38152115 Glycine max
Glyma.09G158200 0.5kb upstream 0.5kb upstream 500 false Chr09: 38151616-38152115 Glycine max
Glyma.09G158200 0.5kb downstream 0.5kb downstream 6535 true Chr09: 38145081-38151615 Glycine max
Glyma.09G158200 0.5kb downstream 0.5kb downstream 500 false Chr09: 38145081-38145580 Glycine max
Glyma.09G158200 1.0kb upstream 1.0kb upstream 7035 true Chr09: 38145581-38152615 Glycine max
Glyma.09G158200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38151616-38152615 Glycine max
Glyma.09G158200 1.0kb downstream 1.0kb downstream 7035 true Chr09: 38144581-38151615 Glycine max
Glyma.09G158200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38144581-38145580 Glycine max
Glyma.09G158200 2.0kb upstream 2.0kb upstream 8035 true Chr09: 38145581-38153615 Glycine max
Glyma.09G158200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38151616-38153615 Glycine max
Glyma.09G158200 2.0kb downstream 2.0kb downstream 8035 true Chr09: 38143581-38151615 Glycine max
Glyma.09G158200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38143581-38145580 Glycine max
Glyma.09G158200 5.0kb upstream 5.0kb upstream 11035 true Chr09: 38145581-38156615 Glycine max
Glyma.09G158200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38151616-38156615 Glycine max
Glyma.09G158200 5.0kb downstream 5.0kb downstream 11035 true Chr09: 38140581-38151615 Glycine max
Glyma.09G158200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38140581-38145580 Glycine max
Glyma.09G158200 10.0kb upstream 10.0kb upstream 16035 true Chr09: 38145581-38161615 Glycine max
Glyma.09G158200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38151616-38161615 Glycine max
Glyma.09G158200 10.0kb downstream 10.0kb downstream 16035 true Chr09: 38135581-38151615 Glycine max
Glyma.09G158200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38135581-38145580 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309351 5265 Fabidae View MSA
124068834 5270 Rosid View MSA
123749348 5271 Pentapetalae View MSA
122787835 5272 Eudicot View MSA
122044598 5273 Angiosperm View MSA
121343839 5274 Embryophyte View MSA
123424692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.7062 0.0 164.743 High  
cufflinks 53.8912 0.0 305.257 High  
cufflinks 26.7366 0.0 129.491 High Low
cufflinks 51.3684 0.0 266.477 High  
cufflinks 84.0217 0.0 564.565 High High
cufflinks 44.5836 0.0 234.92 High  
cufflinks 115.407 0.0 848.256 High High
cufflinks 42.4801 0.0 215.643 High  
cufflinks 52.9992 0.0 294.3 High  
cufflinks 4.996        
cufflinks 0.736       Low
cufflinks 4.518        
cufflinks 11.105     High High
cufflinks 14.846     High High
cufflinks 1.011       Low
cufflinks 3.151        
cufflinks 2.351        
cufflinks 4.94        
cufflinks 6.568        
cufflinks 2.407        
cufflinks 1.514        
cufflinks 2.512        
cufflinks 3.997        
cufflinks 0.876       Low
cufflinks 2.977        
cufflinks 2.311        

0 Strain