Gene : Glyma.09G164200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12056 - DNA-DIRECTED RNA POLYMERASES I, II, AND III Genomic Order:  1642
Name:  ? Glyma.09G164200 Secondary Identifier:  ? PAC:30485949
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G164200 0.5kb upstream 0.5kb upstream 2650 true Chr09: 38829362-38832011 Glycine max
Glyma.09G164200 0.5kb upstream 0.5kb upstream 500 false Chr09: 38829362-38829861 Glycine max
Glyma.09G164200 0.5kb downstream 0.5kb downstream 2650 true Chr09: 38829862-38832511 Glycine max
Glyma.09G164200 0.5kb downstream 0.5kb downstream 500 false Chr09: 38832012-38832511 Glycine max
Glyma.09G164200 1.0kb upstream 1.0kb upstream 3150 true Chr09: 38828862-38832011 Glycine max
Glyma.09G164200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38828862-38829861 Glycine max
Glyma.09G164200 1.0kb downstream 1.0kb downstream 3150 true Chr09: 38829862-38833011 Glycine max
Glyma.09G164200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38832012-38833011 Glycine max
Glyma.09G164200 2.0kb upstream 2.0kb upstream 4150 true Chr09: 38827862-38832011 Glycine max
Glyma.09G164200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38827862-38829861 Glycine max
Glyma.09G164200 2.0kb downstream 2.0kb downstream 4150 true Chr09: 38829862-38834011 Glycine max
Glyma.09G164200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38832012-38834011 Glycine max
Glyma.09G164200 5.0kb upstream 5.0kb upstream 7150 true Chr09: 38824862-38832011 Glycine max
Glyma.09G164200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38824862-38829861 Glycine max
Glyma.09G164200 5.0kb downstream 5.0kb downstream 7150 true Chr09: 38829862-38837011 Glycine max
Glyma.09G164200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38832012-38837011 Glycine max
Glyma.09G164200 10.0kb upstream 10.0kb upstream 12150 true Chr09: 38819862-38832011 Glycine max
Glyma.09G164200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38819862-38829861 Glycine max
Glyma.09G164200 10.0kb downstream 10.0kb downstream 12150 true Chr09: 38829862-38842011 Glycine max
Glyma.09G164200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38832012-38842011 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026326 5273 Angiosperm View MSA
122301900 5265 Fabidae View MSA
124074526 5270 Rosid View MSA
123750212 5271 Pentapetalae View MSA
122790378 5272 Eudicot View MSA
121345650 5274 Embryophyte View MSA
123426861 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.0144 0.0 141.978 High  
cufflinks 47.6414 0.0 127.99 High  
cufflinks 54.8714 0.0 146.755 High  
cufflinks 39.0222 0.0 105.734 High Low
cufflinks 66.6236 0.0 177.744 High  
cufflinks 93.4653 0.0 250.663 High High
cufflinks 55.1846 0.0 147.63 High  
cufflinks 60.3067 0.0 161.01 High  
cufflinks 74.4087 0.0 198.6 High  
cufflinks 6.311        
cufflinks 7.838     High  
cufflinks 9.856     High High
cufflinks 11.672     High High
cufflinks 13.419     High High
cufflinks 7.356     High  
cufflinks 6.228        
cufflinks 6.789     High  
cufflinks 9.098     High  
cufflinks 6.866        
cufflinks 5.823       Low
cufflinks 7.335     High  
cufflinks 6.169        
cufflinks 7.485     High  
cufflinks 7.519     High  
cufflinks 6.923     High  
cufflinks 7.732     High  

0 Strain