Gene : Glyma.09G165000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13872:SF23 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  1650
Name:  ? Glyma.09G165000 Secondary Identifier:  ? PAC:30484530
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G165000 0.5kb upstream 0.5kb upstream 6669 true Chr09: 38908484-38915152 Glycine max
Glyma.09G165000 0.5kb upstream 0.5kb upstream 500 false Chr09: 38908484-38908983 Glycine max
Glyma.09G165000 0.5kb downstream 0.5kb downstream 6669 true Chr09: 38908984-38915652 Glycine max
Glyma.09G165000 0.5kb downstream 0.5kb downstream 500 false Chr09: 38915153-38915652 Glycine max
Glyma.09G165000 1.0kb upstream 1.0kb upstream 7169 true Chr09: 38907984-38915152 Glycine max
Glyma.09G165000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38907984-38908983 Glycine max
Glyma.09G165000 1.0kb downstream 1.0kb downstream 7169 true Chr09: 38908984-38916152 Glycine max
Glyma.09G165000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38915153-38916152 Glycine max
Glyma.09G165000 2.0kb upstream 2.0kb upstream 8169 true Chr09: 38906984-38915152 Glycine max
Glyma.09G165000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38906984-38908983 Glycine max
Glyma.09G165000 2.0kb downstream 2.0kb downstream 8169 true Chr09: 38908984-38917152 Glycine max
Glyma.09G165000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38915153-38917152 Glycine max
Glyma.09G165000 5.0kb upstream 5.0kb upstream 11169 true Chr09: 38903984-38915152 Glycine max
Glyma.09G165000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38903984-38908983 Glycine max
Glyma.09G165000 5.0kb downstream 5.0kb downstream 11169 true Chr09: 38908984-38920152 Glycine max
Glyma.09G165000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38915153-38920152 Glycine max
Glyma.09G165000 10.0kb upstream 10.0kb upstream 16169 true Chr09: 38898984-38915152 Glycine max
Glyma.09G165000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38898984-38908983 Glycine max
Glyma.09G165000 10.0kb downstream 10.0kb downstream 16169 true Chr09: 38908984-38925152 Glycine max
Glyma.09G165000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38915153-38925152 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301014 5265 Fabidae View MSA
124065943 5270 Rosid View MSA
123746907 5271 Pentapetalae View MSA
122791505 5272 Eudicot View MSA
122045472 5273 Angiosperm View MSA
121344925 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.9153 0.0 68.2023 High  
cufflinks 21.0023 0.0 56.8204 High  
cufflinks 8.62251 0.0 23.1765   Low
cufflinks 37.3355 0.0 106.424 High  
cufflinks 36.0201 0.0 102.534 High  
cufflinks 18.3291 0.0 49.3172    
cufflinks 44.892 0.0 131.571 High High
cufflinks 22.1076 0.0 60.0079 High  
cufflinks 24.1814 0.0 66.103 High  
cufflinks 13.115     High  
cufflinks 3.337       Low
cufflinks 7.965     High  
cufflinks 17.505     High High
cufflinks 22.43     High High
cufflinks 3.237       Low
cufflinks 8.183     High  
cufflinks 7.276     High  
cufflinks 9.708     High  
cufflinks 12.581     High  
cufflinks 6.195        
cufflinks 6.018     High  
cufflinks 7.645     High  
cufflinks 9.836     High  
cufflinks 5.63        
cufflinks 5.969        
cufflinks 7.171     High  

0 Strain