Gene : Glyma.09G153300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  1533
Name:  ? Glyma.09G153300 Secondary Identifier:  ? PAC:30484906
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G153300 0.5kb upstream 0.5kb upstream 4785 true Chr09: 37591148-37595932 Glycine max
Glyma.09G153300 0.5kb upstream 0.5kb upstream 500 false Chr09: 37595433-37595932 Glycine max
Glyma.09G153300 0.5kb downstream 0.5kb downstream 4785 true Chr09: 37590648-37595432 Glycine max
Glyma.09G153300 0.5kb downstream 0.5kb downstream 500 false Chr09: 37590648-37591147 Glycine max
Glyma.09G153300 1.0kb upstream 1.0kb upstream 5285 true Chr09: 37591148-37596432 Glycine max
Glyma.09G153300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37595433-37596432 Glycine max
Glyma.09G153300 1.0kb downstream 1.0kb downstream 5285 true Chr09: 37590148-37595432 Glycine max
Glyma.09G153300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37590148-37591147 Glycine max
Glyma.09G153300 2.0kb upstream 2.0kb upstream 6285 true Chr09: 37591148-37597432 Glycine max
Glyma.09G153300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37595433-37597432 Glycine max
Glyma.09G153300 2.0kb downstream 2.0kb downstream 6285 true Chr09: 37589148-37595432 Glycine max
Glyma.09G153300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37589148-37591147 Glycine max
Glyma.09G153300 5.0kb upstream 5.0kb upstream 9285 true Chr09: 37591148-37600432 Glycine max
Glyma.09G153300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37595433-37600432 Glycine max
Glyma.09G153300 5.0kb downstream 5.0kb downstream 9285 true Chr09: 37586148-37595432 Glycine max
Glyma.09G153300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37586148-37591147 Glycine max
Glyma.09G153300 10.0kb upstream 10.0kb upstream 14285 true Chr09: 37591148-37605432 Glycine max
Glyma.09G153300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37595433-37605432 Glycine max
Glyma.09G153300 10.0kb downstream 10.0kb downstream 14285 true Chr09: 37581148-37595432 Glycine max
Glyma.09G153300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37581148-37591147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313551 5265 Fabidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.2289 0.0 72.6648 High High
cufflinks 19.7181 0.0 53.0023   High
cufflinks 4.92596 0.0 15.2617   Low
cufflinks 10.5442 0.0 29.5992    
cufflinks 11.0824 0.0 30.9973    
cufflinks 7.45332 0.0 21.8189    
cufflinks 8.05065 0.0 23.3586    
cufflinks 10.6032 0.0 29.7033    
cufflinks 6.31434 0.0 18.8806    
cufflinks 3.539        
cufflinks 0.736       Low
cufflinks 2.366        
cufflinks 3.042        
cufflinks 2.853        
cufflinks 1.155        
cufflinks 11.938     High High
cufflinks 1.156        
cufflinks 2.583        
cufflinks 6.032        
cufflinks 9.781     High High
cufflinks 0.896       Low
cufflinks 9.676     High High
cufflinks 11.654     High High
cufflinks 0.831       Low
cufflinks 10.636     High High
cufflinks 1.178        

0 Strain