Gene : Glyma.09G188300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23180:SF200 - ARF-GAP DOMAIN AND FG REPEAT-CONTAINING PROTEIN 1 Genomic Order:  1883
Name:  ? Glyma.09G188300 Secondary Identifier:  ? PAC:30486713
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G188300 0.5kb upstream 0.5kb upstream 8514 true Chr09: 41282994-41291507 Glycine max
Glyma.09G188300 0.5kb upstream 0.5kb upstream 500 false Chr09: 41282994-41283493 Glycine max
Glyma.09G188300 0.5kb downstream 0.5kb downstream 8514 true Chr09: 41283494-41292007 Glycine max
Glyma.09G188300 0.5kb downstream 0.5kb downstream 500 false Chr09: 41291508-41292007 Glycine max
Glyma.09G188300 1.0kb upstream 1.0kb upstream 9014 true Chr09: 41282494-41291507 Glycine max
Glyma.09G188300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41282494-41283493 Glycine max
Glyma.09G188300 1.0kb downstream 1.0kb downstream 9014 true Chr09: 41283494-41292507 Glycine max
Glyma.09G188300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41291508-41292507 Glycine max
Glyma.09G188300 2.0kb upstream 2.0kb upstream 10014 true Chr09: 41281494-41291507 Glycine max
Glyma.09G188300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41281494-41283493 Glycine max
Glyma.09G188300 2.0kb downstream 2.0kb downstream 10014 true Chr09: 41283494-41293507 Glycine max
Glyma.09G188300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41291508-41293507 Glycine max
Glyma.09G188300 5.0kb upstream 5.0kb upstream 13014 true Chr09: 41278494-41291507 Glycine max
Glyma.09G188300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41278494-41283493 Glycine max
Glyma.09G188300 5.0kb downstream 5.0kb downstream 13014 true Chr09: 41283494-41296507 Glycine max
Glyma.09G188300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41291508-41296507 Glycine max
Glyma.09G188300 10.0kb upstream 10.0kb upstream 18014 true Chr09: 41273494-41291507 Glycine max
Glyma.09G188300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41273494-41283493 Glycine max
Glyma.09G188300 10.0kb downstream 10.0kb downstream 18014 true Chr09: 41283494-41301507 Glycine max
Glyma.09G188300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41291508-41301507 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250467 5265 Fabidae View MSA
124064710 5270 Rosid View MSA
123751282 5271 Pentapetalae View MSA
122789552 5272 Eudicot View MSA
122042543 5273 Angiosperm View MSA
121351567 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.4861 0.0 30.4187    
cufflinks 5.31039 0.0 20.4103   Low
cufflinks 6.78482 0.0 21.385    
cufflinks 7.96673 0.0 24.6547    
cufflinks 7.02327 0.0 28.3435    
cufflinks 5.72298 0.0 21.691   Low
cufflinks 8.77568 0.0 34.7196   High
cufflinks 7.27837 0.0 26.4004    
cufflinks 5.9577 0.0 22.4566    
cufflinks 0.891       High
cufflinks 0.817        
cufflinks 0.748        
cufflinks 0.804        
cufflinks 0.712        
cufflinks 0.769        
cufflinks 0.73        
cufflinks 0.734        
cufflinks 0.789        
cufflinks 0.659       Low
cufflinks 0.695        
cufflinks 0.97       High
cufflinks 0.696        
cufflinks 0.791        
cufflinks 0.707        
cufflinks 0.662       Low
cufflinks 0.713        

0 Strain