Gene : Glyma.09G183300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11278 - 40S RIBOSOMAL PROTEIN S7 Genomic Order:  1833
Name:  ? Glyma.09G183300 Secondary Identifier:  ? PAC:30483097
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G183300 0.5kb upstream 0.5kb upstream 3050 true Chr09: 40842446-40845495 Glycine max
Glyma.09G183300 0.5kb upstream 0.5kb upstream 500 false Chr09: 40844996-40845495 Glycine max
Glyma.09G183300 0.5kb downstream 0.5kb downstream 3050 true Chr09: 40841946-40844995 Glycine max
Glyma.09G183300 0.5kb downstream 0.5kb downstream 500 false Chr09: 40841946-40842445 Glycine max
Glyma.09G183300 1.0kb upstream 1.0kb upstream 3550 true Chr09: 40842446-40845995 Glycine max
Glyma.09G183300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40844996-40845995 Glycine max
Glyma.09G183300 1.0kb downstream 1.0kb downstream 3550 true Chr09: 40841446-40844995 Glycine max
Glyma.09G183300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40841446-40842445 Glycine max
Glyma.09G183300 2.0kb upstream 2.0kb upstream 4550 true Chr09: 40842446-40846995 Glycine max
Glyma.09G183300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40844996-40846995 Glycine max
Glyma.09G183300 2.0kb downstream 2.0kb downstream 4550 true Chr09: 40840446-40844995 Glycine max
Glyma.09G183300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40840446-40842445 Glycine max
Glyma.09G183300 5.0kb upstream 5.0kb upstream 7550 true Chr09: 40842446-40849995 Glycine max
Glyma.09G183300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40844996-40849995 Glycine max
Glyma.09G183300 5.0kb downstream 5.0kb downstream 7550 true Chr09: 40837446-40844995 Glycine max
Glyma.09G183300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40837446-40842445 Glycine max
Glyma.09G183300 10.0kb upstream 10.0kb upstream 12550 true Chr09: 40842446-40854995 Glycine max
Glyma.09G183300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40844996-40854995 Glycine max
Glyma.09G183300 10.0kb downstream 10.0kb downstream 12550 true Chr09: 40832446-40844995 Glycine max
Glyma.09G183300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40832446-40842445 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309185 5265 Fabidae View MSA
124072179 5270 Rosid View MSA
123738806 5271 Pentapetalae View MSA
122790365 5272 Eudicot View MSA
122049624 5273 Angiosperm View MSA
121350369 5274 Embryophyte View MSA
123424764 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.7502 0.0 368.988 High  
cufflinks 131.029 0.0 485.332 High  
cufflinks 64.5714 0.0 233.687 High Low
cufflinks 104.337 0.0 421.548 High  
cufflinks 172.554 0.0 705.377 High High
cufflinks 152.515 0.0 596.984 High  
cufflinks 191.082 0.0 813.611 High High
cufflinks 116.945 0.0 419.227 High  
cufflinks 128.531 0.0 550.463 High  
cufflinks 19.154     High  
cufflinks 2.639       Low
cufflinks 17.622     High  
cufflinks 40.029     High High
cufflinks 54.311     High High
cufflinks 4.439       Low
cufflinks 17.133     High  
cufflinks 11.484     High  
cufflinks 17.947     High  
cufflinks 26.222     High  
cufflinks 11.341     High  
cufflinks 5.856     High Low
cufflinks 12.512     High  
cufflinks 21.722     High  
cufflinks 4.342       Low
cufflinks 15.01     High  
cufflinks 9.691     High  

0 Strain