Gene : Glyma.09G231400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  2314
Name:  ? Glyma.09G231400 Secondary Identifier:  ? PAC:30485227
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G231400 0.5kb upstream 0.5kb upstream 6629 true Chr09: 45470637-45477265 Glycine max
Glyma.09G231400 0.5kb upstream 0.5kb upstream 500 false Chr09: 45470637-45471136 Glycine max
Glyma.09G231400 0.5kb downstream 0.5kb downstream 6629 true Chr09: 45471137-45477765 Glycine max
Glyma.09G231400 0.5kb downstream 0.5kb downstream 500 false Chr09: 45477266-45477765 Glycine max
Glyma.09G231400 1.0kb upstream 1.0kb upstream 7129 true Chr09: 45470137-45477265 Glycine max
Glyma.09G231400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45470137-45471136 Glycine max
Glyma.09G231400 1.0kb downstream 1.0kb downstream 7129 true Chr09: 45471137-45478265 Glycine max
Glyma.09G231400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45477266-45478265 Glycine max
Glyma.09G231400 2.0kb upstream 2.0kb upstream 8129 true Chr09: 45469137-45477265 Glycine max
Glyma.09G231400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45469137-45471136 Glycine max
Glyma.09G231400 2.0kb downstream 2.0kb downstream 8129 true Chr09: 45471137-45479265 Glycine max
Glyma.09G231400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45477266-45479265 Glycine max
Glyma.09G231400 5.0kb upstream 5.0kb upstream 11129 true Chr09: 45466137-45477265 Glycine max
Glyma.09G231400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45466137-45471136 Glycine max
Glyma.09G231400 5.0kb downstream 5.0kb downstream 11129 true Chr09: 45471137-45482265 Glycine max
Glyma.09G231400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45477266-45482265 Glycine max
Glyma.09G231400 10.0kb upstream 10.0kb upstream 16129 true Chr09: 45461137-45477265 Glycine max
Glyma.09G231400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45461137-45471136 Glycine max
Glyma.09G231400 10.0kb downstream 10.0kb downstream 16129 true Chr09: 45471137-45487265 Glycine max
Glyma.09G231400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45477266-45487265 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304944 5265 Fabidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.83701 0.0 38.7697    
cufflinks 5.01906 0.0 22.0447    
cufflinks 20.4047 0.0 77.6204 High  
cufflinks 3.30827 0.0 15.7523    
cufflinks 8.3108 0.0 33.6267    
cufflinks 61.402 0.0 291.712 High High
cufflinks 2.60813 0.0 13.4336   Low
cufflinks 5.44097 0.0 23.5215    
cufflinks 6.21568 0.0 28.6194    
cufflinks 0.801        
cufflinks 3.298       High
cufflinks 1.279        
cufflinks 1.524        
cufflinks 1.353        
cufflinks 0.922        
cufflinks 0.869        
cufflinks 2.748       High
cufflinks 1.044        
cufflinks 0.786        
cufflinks 0.422       Low
cufflinks 1.908        
cufflinks 0.595       Low
cufflinks 0.671        
cufflinks 4.043       High
cufflinks 0.663        
cufflinks 4.003       High

0 Strain