Gene : Glyma.09G225300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32295:SF35 - PROTEIN IQ-DOMAIN 11 Genomic Order:  2253
Name:  ? Glyma.09G225300 Secondary Identifier:  ? PAC:30485909
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G225300 0.5kb upstream 0.5kb upstream 4219 true Chr09: 44990509-44994727 Glycine max
Glyma.09G225300 0.5kb upstream 0.5kb upstream 500 false Chr09: 44990509-44991008 Glycine max
Glyma.09G225300 0.5kb downstream 0.5kb downstream 4219 true Chr09: 44991009-44995227 Glycine max
Glyma.09G225300 0.5kb downstream 0.5kb downstream 500 false Chr09: 44994728-44995227 Glycine max
Glyma.09G225300 1.0kb upstream 1.0kb upstream 4719 true Chr09: 44990009-44994727 Glycine max
Glyma.09G225300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 44990009-44991008 Glycine max
Glyma.09G225300 1.0kb downstream 1.0kb downstream 4719 true Chr09: 44991009-44995727 Glycine max
Glyma.09G225300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 44994728-44995727 Glycine max
Glyma.09G225300 2.0kb upstream 2.0kb upstream 5719 true Chr09: 44989009-44994727 Glycine max
Glyma.09G225300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 44989009-44991008 Glycine max
Glyma.09G225300 2.0kb downstream 2.0kb downstream 5719 true Chr09: 44991009-44996727 Glycine max
Glyma.09G225300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 44994728-44996727 Glycine max
Glyma.09G225300 5.0kb upstream 5.0kb upstream 8719 true Chr09: 44986009-44994727 Glycine max
Glyma.09G225300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 44986009-44991008 Glycine max
Glyma.09G225300 5.0kb downstream 5.0kb downstream 8719 true Chr09: 44991009-44999727 Glycine max
Glyma.09G225300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 44994728-44999727 Glycine max
Glyma.09G225300 10.0kb upstream 10.0kb upstream 13719 true Chr09: 44981009-44994727 Glycine max
Glyma.09G225300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 44981009-44991008 Glycine max
Glyma.09G225300 10.0kb downstream 10.0kb downstream 13719 true Chr09: 44991009-45004727 Glycine max
Glyma.09G225300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 44994728-45004727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307048 5265 Fabidae View MSA
124062975 5270 Rosid View MSA
123737265 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.08161 0.0 14.8134    
cufflinks 12.9253 0.0 52.3194   High
cufflinks 4.07748 0.0 20.1667    
cufflinks 1.29008 0.0 6.45992    
cufflinks 2.03697 0.0 11.6195    
cufflinks 0.428767 0.0 2.04276   Low
cufflinks 0.878762 0.0 5.70343    
cufflinks 6.62349 0.0 26.4872   High
cufflinks 0.421717 0.0 3.65625   Low
cufflinks 2.66       High
cufflinks 0.003     Low Low
cufflinks 0.832        
cufflinks 0.082     Low  
cufflinks 0.128        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.669        
cufflinks 0.015     Low  
cufflinks 1.09        
cufflinks 1.047        
cufflinks 1.038        
cufflinks 0.007     Low Low
cufflinks 0.928        
cufflinks 0.626        
cufflinks 0.001     Low Low
cufflinks 0.751        
cufflinks 0.011     Low Low

0 Strain