Gene : Glyma.09G225400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6 Genomic Order:  2254
Name:  ? Glyma.09G225400 Secondary Identifier:  ? PAC:30482603
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G225400 0.5kb upstream 0.5kb upstream 3568 true Chr09: 45006288-45009855 Glycine max
Glyma.09G225400 0.5kb upstream 0.5kb upstream 500 false Chr09: 45006288-45006787 Glycine max
Glyma.09G225400 0.5kb downstream 0.5kb downstream 3568 true Chr09: 45006788-45010355 Glycine max
Glyma.09G225400 0.5kb downstream 0.5kb downstream 500 false Chr09: 45009856-45010355 Glycine max
Glyma.09G225400 1.0kb upstream 1.0kb upstream 4068 true Chr09: 45005788-45009855 Glycine max
Glyma.09G225400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45005788-45006787 Glycine max
Glyma.09G225400 1.0kb downstream 1.0kb downstream 4068 true Chr09: 45006788-45010855 Glycine max
Glyma.09G225400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45009856-45010855 Glycine max
Glyma.09G225400 2.0kb upstream 2.0kb upstream 5068 true Chr09: 45004788-45009855 Glycine max
Glyma.09G225400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45004788-45006787 Glycine max
Glyma.09G225400 2.0kb downstream 2.0kb downstream 5068 true Chr09: 45006788-45011855 Glycine max
Glyma.09G225400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45009856-45011855 Glycine max
Glyma.09G225400 5.0kb upstream 5.0kb upstream 8068 true Chr09: 45001788-45009855 Glycine max
Glyma.09G225400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45001788-45006787 Glycine max
Glyma.09G225400 5.0kb downstream 5.0kb downstream 8068 true Chr09: 45006788-45014855 Glycine max
Glyma.09G225400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45009856-45014855 Glycine max
Glyma.09G225400 10.0kb upstream 10.0kb upstream 13068 true Chr09: 44996788-45009855 Glycine max
Glyma.09G225400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 44996788-45006787 Glycine max
Glyma.09G225400 10.0kb downstream 10.0kb downstream 13068 true Chr09: 45006788-45019855 Glycine max
Glyma.09G225400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45009856-45019855 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304864 5265 Fabidae View MSA
124067544 5270 Rosid View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20163 0.0 6.84348    
cufflinks 0.423692 0.0 1.55439    
cufflinks 14.373 0.0 38.3664   High
cufflinks 1.39059 0.0 4.60183    
cufflinks 1.4201 0.0 4.69558    
cufflinks 0.963441 0.0 3.33055    
cufflinks 0.119896 0.0 0.466337 Low Low
cufflinks 0.247914 0.0 0.933173    
cufflinks 0.962703 0.0 3.3258    
cufflinks 0.53        
cufflinks 1.528        
cufflinks 21.598     High High
cufflinks 1.266        
cufflinks 1.746        
cufflinks 1.631        
cufflinks 0.668        
cufflinks 3.756        
cufflinks 3.943        
cufflinks 0.868        
cufflinks 0.227       Low
cufflinks 1.343        
cufflinks 0.428       Low
cufflinks 3.545        
cufflinks 2.908        
cufflinks 0.546        
cufflinks 3.809        

0 Strain