Gene : Glyma.09G227900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10209:SF216 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  2279
Name:  ? Glyma.09G227900 Secondary Identifier:  ? PAC:30483043
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G227900 0.5kb upstream 0.5kb upstream 8919 true Chr09: 45217421-45226339 Glycine max
Glyma.09G227900 0.5kb upstream 0.5kb upstream 500 false Chr09: 45217421-45217920 Glycine max
Glyma.09G227900 0.5kb downstream 0.5kb downstream 8919 true Chr09: 45217921-45226839 Glycine max
Glyma.09G227900 0.5kb downstream 0.5kb downstream 500 false Chr09: 45226340-45226839 Glycine max
Glyma.09G227900 1.0kb upstream 1.0kb upstream 9419 true Chr09: 45216921-45226339 Glycine max
Glyma.09G227900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45216921-45217920 Glycine max
Glyma.09G227900 1.0kb downstream 1.0kb downstream 9419 true Chr09: 45217921-45227339 Glycine max
Glyma.09G227900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45226340-45227339 Glycine max
Glyma.09G227900 2.0kb upstream 2.0kb upstream 10419 true Chr09: 45215921-45226339 Glycine max
Glyma.09G227900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45215921-45217920 Glycine max
Glyma.09G227900 2.0kb downstream 2.0kb downstream 10419 true Chr09: 45217921-45228339 Glycine max
Glyma.09G227900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45226340-45228339 Glycine max
Glyma.09G227900 5.0kb upstream 5.0kb upstream 13419 true Chr09: 45212921-45226339 Glycine max
Glyma.09G227900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45212921-45217920 Glycine max
Glyma.09G227900 5.0kb downstream 5.0kb downstream 13419 true Chr09: 45217921-45231339 Glycine max
Glyma.09G227900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45226340-45231339 Glycine max
Glyma.09G227900 10.0kb upstream 10.0kb upstream 18419 true Chr09: 45207921-45226339 Glycine max
Glyma.09G227900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45207921-45217920 Glycine max
Glyma.09G227900 10.0kb downstream 10.0kb downstream 18419 true Chr09: 45217921-45236339 Glycine max
Glyma.09G227900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45226340-45236339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307589 5265 Fabidae View MSA
124069056 5270 Rosid View MSA
123738398 5271 Pentapetalae View MSA
122787492 5272 Eudicot View MSA
122045457 5273 Angiosperm View MSA
121347925 5274 Embryophyte View MSA
123428862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97047 0.0 13.581    
cufflinks 1.13184 0.0 6.43763    
cufflinks 10.968 0.0 39.5587   High
cufflinks 0.980835 0.0 6.56217    
cufflinks 1.59978 0.0 6.41139    
cufflinks 4.22077 0.0 17.08    
cufflinks 1.32398 0.0 7.62673    
cufflinks 0.734677 0.0 3.29952   Low
cufflinks 3.02439 0.0 13.8368    
cufflinks 0.05     Low Low
cufflinks 0.988       High
cufflinks 0.748        
cufflinks 0.232        
cufflinks 0.199        
cufflinks 0.739        
cufflinks 0.058     Low Low
cufflinks 0.527        
cufflinks 0.281        
cufflinks 0.201        
cufflinks 0.065     Low Low
cufflinks 0.74        
cufflinks 0.086     Low  
cufflinks 0.045     Low Low
cufflinks 1.076       High
cufflinks 0.096     Low  
cufflinks 0.679        

0 Strain