Gene : Glyma.09G216700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  2167
Name:  ? Glyma.09G216700 Secondary Identifier:  ? PAC:30482994
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G216700 0.5kb upstream 0.5kb upstream 4727 true Chr09: 43981358-43986084 Glycine max
Glyma.09G216700 0.5kb upstream 0.5kb upstream 500 false Chr09: 43985585-43986084 Glycine max
Glyma.09G216700 0.5kb downstream 0.5kb downstream 4727 true Chr09: 43980858-43985584 Glycine max
Glyma.09G216700 0.5kb downstream 0.5kb downstream 500 false Chr09: 43980858-43981357 Glycine max
Glyma.09G216700 1.0kb upstream 1.0kb upstream 5227 true Chr09: 43981358-43986584 Glycine max
Glyma.09G216700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 43985585-43986584 Glycine max
Glyma.09G216700 1.0kb downstream 1.0kb downstream 5227 true Chr09: 43980358-43985584 Glycine max
Glyma.09G216700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 43980358-43981357 Glycine max
Glyma.09G216700 2.0kb upstream 2.0kb upstream 6227 true Chr09: 43981358-43987584 Glycine max
Glyma.09G216700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 43985585-43987584 Glycine max
Glyma.09G216700 2.0kb downstream 2.0kb downstream 6227 true Chr09: 43979358-43985584 Glycine max
Glyma.09G216700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 43979358-43981357 Glycine max
Glyma.09G216700 5.0kb upstream 5.0kb upstream 9227 true Chr09: 43981358-43990584 Glycine max
Glyma.09G216700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 43985585-43990584 Glycine max
Glyma.09G216700 5.0kb downstream 5.0kb downstream 9227 true Chr09: 43976358-43985584 Glycine max
Glyma.09G216700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 43976358-43981357 Glycine max
Glyma.09G216700 10.0kb upstream 10.0kb upstream 14227 true Chr09: 43981358-43995584 Glycine max
Glyma.09G216700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 43985585-43995584 Glycine max
Glyma.09G216700 10.0kb downstream 10.0kb downstream 14227 true Chr09: 43971358-43985584 Glycine max
Glyma.09G216700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 43971358-43981357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299539 5265 Fabidae View MSA
124063704 5270 Rosid View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.15465 0.0 45.7426    
cufflinks 10.6223 0.0 50.6163    
cufflinks 15.2135 0.0 73.1218   High
cufflinks 7.25381 0.0 39.3242   Low
cufflinks 11.8638 0.0 55.712    
cufflinks 7.14213 0.0 31.8109   Low
cufflinks 14.2071 0.0 61.2737   High
cufflinks 7.7207 0.0 40.6609    
cufflinks 7.76658 0.0 39.3222    
cufflinks 0.575        
cufflinks 0.295       Low
cufflinks 0.865        
cufflinks 1.174        
cufflinks 1.831       High
cufflinks 0.298       Low
cufflinks 1.039        
cufflinks 0.197       Low
cufflinks 0.998        
cufflinks 0.899        
cufflinks 1.005        
cufflinks 0.396        
cufflinks 1.129        
cufflinks 1.327       High
cufflinks 0.417        
cufflinks 1.092        
cufflinks 0.263       Low

0 Strain