Gene : Glyma.09G214400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  2144
Name:  ? Glyma.09G214400 Secondary Identifier:  ? PAC:30482963
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G214400 0.5kb upstream 0.5kb upstream 3156 true Chr09: 43772540-43775695 Glycine max
Glyma.09G214400 0.5kb upstream 0.5kb upstream 500 false Chr09: 43772540-43773039 Glycine max
Glyma.09G214400 0.5kb downstream 0.5kb downstream 3156 true Chr09: 43773040-43776195 Glycine max
Glyma.09G214400 0.5kb downstream 0.5kb downstream 500 false Chr09: 43775696-43776195 Glycine max
Glyma.09G214400 1.0kb upstream 1.0kb upstream 3656 true Chr09: 43772040-43775695 Glycine max
Glyma.09G214400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 43772040-43773039 Glycine max
Glyma.09G214400 1.0kb downstream 1.0kb downstream 3656 true Chr09: 43773040-43776695 Glycine max
Glyma.09G214400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 43775696-43776695 Glycine max
Glyma.09G214400 2.0kb upstream 2.0kb upstream 4656 true Chr09: 43771040-43775695 Glycine max
Glyma.09G214400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 43771040-43773039 Glycine max
Glyma.09G214400 2.0kb downstream 2.0kb downstream 4656 true Chr09: 43773040-43777695 Glycine max
Glyma.09G214400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 43775696-43777695 Glycine max
Glyma.09G214400 5.0kb upstream 5.0kb upstream 7656 true Chr09: 43768040-43775695 Glycine max
Glyma.09G214400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 43768040-43773039 Glycine max
Glyma.09G214400 5.0kb downstream 5.0kb downstream 7656 true Chr09: 43773040-43780695 Glycine max
Glyma.09G214400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 43775696-43780695 Glycine max
Glyma.09G214400 10.0kb upstream 10.0kb upstream 12656 true Chr09: 43763040-43775695 Glycine max
Glyma.09G214400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 43763040-43773039 Glycine max
Glyma.09G214400 10.0kb downstream 10.0kb downstream 12656 true Chr09: 43773040-43785695 Glycine max
Glyma.09G214400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 43775696-43785695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310849 5265 Fabidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.7482 0.0 353.589 High  
cufflinks 134.54 0.0 634.9 High  
cufflinks 44.1371 0.0 172.767 High Low
cufflinks 80.8163 0.0 362.511 High  
cufflinks 223.309 0.0 1336.41 High High
cufflinks 209.364 0.0 1208.34 High High
cufflinks 156.131 0.0 784.893 High  
cufflinks 100.437 0.0 430.93 High  
cufflinks 151.593 0.0 756.802 High  
cufflinks 15.903     High  
cufflinks 5.366       Low
cufflinks 12.729     High  
cufflinks 52.854     High High
cufflinks 75.288     High High
cufflinks 6.001     High Low
cufflinks 16.166     High  
cufflinks 12.022     High  
cufflinks 14.313     High  
cufflinks 21.696     High  
cufflinks 8.683     High  
cufflinks 8.913     High  
cufflinks 10.422     High  
cufflinks 21.053     High  
cufflinks 6.352     High Low
cufflinks 13.705     High  
cufflinks 12.117     High  

0 Strain