Gene : Glyma.09G254700 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Genomic Order:  2547
Name:  ? Glyma.09G254700 Secondary Identifier:  ? PAC:30486338
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PANTO-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G254700 0.5kb upstream 0.5kb upstream 4757 true Chr09: 47394314-47399070 Glycine max
Glyma.09G254700 0.5kb upstream 0.5kb upstream 500 false Chr09: 47394314-47394813 Glycine max
Glyma.09G254700 0.5kb downstream 0.5kb downstream 4757 true Chr09: 47394814-47399570 Glycine max
Glyma.09G254700 0.5kb downstream 0.5kb downstream 500 false Chr09: 47399071-47399570 Glycine max
Glyma.09G254700 1.0kb upstream 1.0kb upstream 5257 true Chr09: 47393814-47399070 Glycine max
Glyma.09G254700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47393814-47394813 Glycine max
Glyma.09G254700 1.0kb downstream 1.0kb downstream 5257 true Chr09: 47394814-47400070 Glycine max
Glyma.09G254700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47399071-47400070 Glycine max
Glyma.09G254700 2.0kb upstream 2.0kb upstream 6257 true Chr09: 47392814-47399070 Glycine max
Glyma.09G254700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47392814-47394813 Glycine max
Glyma.09G254700 2.0kb downstream 2.0kb downstream 6257 true Chr09: 47394814-47401070 Glycine max
Glyma.09G254700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47399071-47401070 Glycine max
Glyma.09G254700 5.0kb upstream 5.0kb upstream 9257 true Chr09: 47389814-47399070 Glycine max
Glyma.09G254700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47389814-47394813 Glycine max
Glyma.09G254700 5.0kb downstream 5.0kb downstream 9257 true Chr09: 47394814-47404070 Glycine max
Glyma.09G254700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47399071-47404070 Glycine max
Glyma.09G254700 10.0kb upstream 10.0kb upstream 14257 true Chr09: 47384814-47399070 Glycine max
Glyma.09G254700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47384814-47394813 Glycine max
Glyma.09G254700 10.0kb downstream 10.0kb downstream 14257 true Chr09: 47394814-47409070 Glycine max
Glyma.09G254700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47399071-47409070 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298858 5265 Fabidae View MSA
124040119 5270 Rosid View MSA
123611689 5271 Pentapetalae View MSA
122646239 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0663964 0.0 0.270863 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.5283 0.0 14.9406    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0149203 0.0 0.0776258 Low Low
cufflinks 9.92278 0.0 31.4979   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.844     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  

0 Strain