Gene : Glyma.09G256600 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2566
Name:  ? Glyma.09G256600 Secondary Identifier:  ? PAC:30483564
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G256600 0.5kb upstream 0.5kb upstream 3895 true Chr09: 47564159-47568053 Glycine max
Glyma.09G256600 0.5kb upstream 0.5kb upstream 500 false Chr09: 47564159-47564658 Glycine max
Glyma.09G256600 0.5kb downstream 0.5kb downstream 3895 true Chr09: 47564659-47568553 Glycine max
Glyma.09G256600 0.5kb downstream 0.5kb downstream 500 false Chr09: 47568054-47568553 Glycine max
Glyma.09G256600 1.0kb upstream 1.0kb upstream 4395 true Chr09: 47563659-47568053 Glycine max
Glyma.09G256600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47563659-47564658 Glycine max
Glyma.09G256600 1.0kb downstream 1.0kb downstream 4395 true Chr09: 47564659-47569053 Glycine max
Glyma.09G256600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47568054-47569053 Glycine max
Glyma.09G256600 2.0kb upstream 2.0kb upstream 5395 true Chr09: 47562659-47568053 Glycine max
Glyma.09G256600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47562659-47564658 Glycine max
Glyma.09G256600 2.0kb downstream 2.0kb downstream 5395 true Chr09: 47564659-47570053 Glycine max
Glyma.09G256600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47568054-47570053 Glycine max
Glyma.09G256600 5.0kb upstream 5.0kb upstream 8395 true Chr09: 47559659-47568053 Glycine max
Glyma.09G256600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47559659-47564658 Glycine max
Glyma.09G256600 5.0kb downstream 5.0kb downstream 8395 true Chr09: 47564659-47573053 Glycine max
Glyma.09G256600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47568054-47573053 Glycine max
Glyma.09G256600 10.0kb upstream 10.0kb upstream 13395 true Chr09: 47554659-47568053 Glycine max
Glyma.09G256600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47554659-47564658 Glycine max
Glyma.09G256600 10.0kb downstream 10.0kb downstream 13395 true Chr09: 47564659-47578053 Glycine max
Glyma.09G256600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47568054-47578053 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.452759 0.0 1.66225    
cufflinks 0.777959 0.0 2.75057    
cufflinks 0.458702 0.0 1.67605    
cufflinks 1.00571 0.0 3.47892   High
cufflinks 0.560668 0.0 2.03491    
cufflinks 0.43362 0.0 1.59449   Low
cufflinks 0.887294 0.0 3.11699   High
cufflinks 0.495996 0.0 1.80912    
cufflinks 0.743251 0.0 2.63972    
cufflinks 0.316        
cufflinks 0.078       Low
cufflinks 0.511        
cufflinks 0.618        
cufflinks 0.515        
cufflinks 0.184        
cufflinks 0.429        
cufflinks 0.125       Low
cufflinks 0.82       High
cufflinks 0.545        
cufflinks 0.405        
cufflinks 0.079       Low
cufflinks 0.491        
cufflinks 0.492        
cufflinks 0.147        
cufflinks 0.438        
cufflinks 0.08       Low

0 Strain