Gene : Glyma.09G257700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22970:SF23 - AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2577
Name:  ? Glyma.09G257700 Secondary Identifier:  ? PAC:30485976
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G257700 0.5kb upstream 0.5kb upstream 11372 true Chr09: 47657243-47668614 Glycine max
Glyma.09G257700 0.5kb upstream 0.5kb upstream 500 false Chr09: 47657243-47657742 Glycine max
Glyma.09G257700 0.5kb downstream 0.5kb downstream 11372 true Chr09: 47657743-47669114 Glycine max
Glyma.09G257700 0.5kb downstream 0.5kb downstream 500 false Chr09: 47668615-47669114 Glycine max
Glyma.09G257700 1.0kb upstream 1.0kb upstream 11872 true Chr09: 47656743-47668614 Glycine max
Glyma.09G257700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47656743-47657742 Glycine max
Glyma.09G257700 1.0kb downstream 1.0kb downstream 11872 true Chr09: 47657743-47669614 Glycine max
Glyma.09G257700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47668615-47669614 Glycine max
Glyma.09G257700 2.0kb upstream 2.0kb upstream 12872 true Chr09: 47655743-47668614 Glycine max
Glyma.09G257700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47655743-47657742 Glycine max
Glyma.09G257700 2.0kb downstream 2.0kb downstream 12872 true Chr09: 47657743-47670614 Glycine max
Glyma.09G257700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47668615-47670614 Glycine max
Glyma.09G257700 5.0kb upstream 5.0kb upstream 15872 true Chr09: 47652743-47668614 Glycine max
Glyma.09G257700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47652743-47657742 Glycine max
Glyma.09G257700 5.0kb downstream 5.0kb downstream 15872 true Chr09: 47657743-47673614 Glycine max
Glyma.09G257700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47668615-47673614 Glycine max
Glyma.09G257700 10.0kb upstream 10.0kb upstream 20872 true Chr09: 47647743-47668614 Glycine max
Glyma.09G257700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47647743-47657742 Glycine max
Glyma.09G257700 10.0kb downstream 10.0kb downstream 20872 true Chr09: 47657743-47678614 Glycine max
Glyma.09G257700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47668615-47678614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314510 5265 Fabidae View MSA
124068445 5270 Rosid View MSA
123753441 5271 Pentapetalae View MSA
122795804 5272 Eudicot View MSA
122049441 5273 Angiosperm View MSA
121348389 5274 Embryophyte View MSA
123380842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.76702 0.0 47.6786    
cufflinks 3.45026 0.0 29.6623    
cufflinks 2.76571 0.0 341.29    
cufflinks 3.10878 0.0 44.6436    
cufflinks 3.06357 0.0 45.4018    
cufflinks 2.20412 0.0 40.4039   Low
cufflinks 4.45277 0.0 31.1138   High
cufflinks 3.05299 0.0 71.0513    
cufflinks 2.89 0.0 72.0601    
cufflinks 0.224        
cufflinks 0.296        
cufflinks 0.45       High
cufflinks 0.388        
cufflinks 0.504       High
cufflinks 0.14       Low
cufflinks 0.282        
cufflinks 0.131       Low
cufflinks 0.329        
cufflinks 0.533       High
cufflinks 0.252        
cufflinks 0.336        
cufflinks 0.272        
cufflinks 0.285        
cufflinks 0.414        
cufflinks 0.248        
cufflinks 0.208        

0 Strain