Gene : Glyma.09G257900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Genomic Order:  2579
Name:  ? Glyma.09G257900 Secondary Identifier:  ? PAC:30486271
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G257900 0.5kb upstream 0.5kb upstream 12619 true Chr09: 47674491-47687109 Glycine max
Glyma.09G257900 0.5kb upstream 0.5kb upstream 500 false Chr09: 47686610-47687109 Glycine max
Glyma.09G257900 0.5kb downstream 0.5kb downstream 12619 true Chr09: 47673991-47686609 Glycine max
Glyma.09G257900 0.5kb downstream 0.5kb downstream 500 false Chr09: 47673991-47674490 Glycine max
Glyma.09G257900 1.0kb upstream 1.0kb upstream 13119 true Chr09: 47674491-47687609 Glycine max
Glyma.09G257900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47686610-47687609 Glycine max
Glyma.09G257900 1.0kb downstream 1.0kb downstream 13119 true Chr09: 47673491-47686609 Glycine max
Glyma.09G257900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47673491-47674490 Glycine max
Glyma.09G257900 2.0kb upstream 2.0kb upstream 14119 true Chr09: 47674491-47688609 Glycine max
Glyma.09G257900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47686610-47688609 Glycine max
Glyma.09G257900 2.0kb downstream 2.0kb downstream 14119 true Chr09: 47672491-47686609 Glycine max
Glyma.09G257900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47672491-47674490 Glycine max
Glyma.09G257900 5.0kb upstream 5.0kb upstream 17119 true Chr09: 47674491-47691609 Glycine max
Glyma.09G257900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47686610-47691609 Glycine max
Glyma.09G257900 5.0kb downstream 5.0kb downstream 17119 true Chr09: 47669491-47686609 Glycine max
Glyma.09G257900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47669491-47674490 Glycine max
Glyma.09G257900 10.0kb upstream 10.0kb upstream 22119 true Chr09: 47674491-47696609 Glycine max
Glyma.09G257900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47686610-47696609 Glycine max
Glyma.09G257900 10.0kb downstream 10.0kb downstream 22119 true Chr09: 47664491-47686609 Glycine max
Glyma.09G257900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47664491-47674490 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656128 5273 Angiosperm View MSA
122297518 5265 Fabidae View MSA
124036054 5270 Rosid View MSA
123609466 5271 Pentapetalae View MSA
122644114 5272 Eudicot View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.01955 0.0 16.2833    
cufflinks 5.95533 0.0 16.0933    
cufflinks 7.67514 0.0 21.1611    
cufflinks 7.82685 0.0 21.5855    
cufflinks 6.93332 0.0 18.9204    
cufflinks 4.44505 0.0 11.8858   Low
cufflinks 11.9367 0.0 34.4134   High
cufflinks 6.7814 0.0 18.492    
cufflinks 8.3716 0.0 23.1956    
cufflinks 6.757        
cufflinks 4.985       Low
cufflinks 6.825        
cufflinks 6.725        
cufflinks 6.561        
cufflinks 6.409     High  
cufflinks 8.563     High High
cufflinks 4.802       Low
cufflinks 9.012     High High
cufflinks 8.351     High High
cufflinks 6.501        
cufflinks 4.93       Low
cufflinks 7.755     High  
cufflinks 7.67     High  
cufflinks 5.505        
cufflinks 6.44        
cufflinks 6.161        

0 Strain