Gene : Glyma.09G248600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11073:SF6 - CALRETICULIN-3 Genomic Order:  2486
Name:  ? Glyma.09G248600 Secondary Identifier:  ? PAC:30483310
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G248600 0.5kb upstream 0.5kb upstream 6200 true Chr09: 46984471-46990670 Glycine max
Glyma.09G248600 0.5kb upstream 0.5kb upstream 500 false Chr09: 46984471-46984970 Glycine max
Glyma.09G248600 0.5kb downstream 0.5kb downstream 6200 true Chr09: 46984971-46991170 Glycine max
Glyma.09G248600 0.5kb downstream 0.5kb downstream 500 false Chr09: 46990671-46991170 Glycine max
Glyma.09G248600 1.0kb upstream 1.0kb upstream 6700 true Chr09: 46983971-46990670 Glycine max
Glyma.09G248600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46983971-46984970 Glycine max
Glyma.09G248600 1.0kb downstream 1.0kb downstream 6700 true Chr09: 46984971-46991670 Glycine max
Glyma.09G248600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46990671-46991670 Glycine max
Glyma.09G248600 2.0kb upstream 2.0kb upstream 7700 true Chr09: 46982971-46990670 Glycine max
Glyma.09G248600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46982971-46984970 Glycine max
Glyma.09G248600 2.0kb downstream 2.0kb downstream 7700 true Chr09: 46984971-46992670 Glycine max
Glyma.09G248600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46990671-46992670 Glycine max
Glyma.09G248600 5.0kb upstream 5.0kb upstream 10700 true Chr09: 46979971-46990670 Glycine max
Glyma.09G248600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46979971-46984970 Glycine max
Glyma.09G248600 5.0kb downstream 5.0kb downstream 10700 true Chr09: 46984971-46995670 Glycine max
Glyma.09G248600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46990671-46995670 Glycine max
Glyma.09G248600 10.0kb upstream 10.0kb upstream 15700 true Chr09: 46974971-46990670 Glycine max
Glyma.09G248600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46974971-46984970 Glycine max
Glyma.09G248600 10.0kb downstream 10.0kb downstream 15700 true Chr09: 46984971-47000670 Glycine max
Glyma.09G248600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46990671-47000670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299224 5265 Fabidae View MSA
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 183.042 0.0 1019.03 High High
cufflinks 14.9991 0.0 49.4039    
cufflinks 23.5802 0.0 78.6262 High  
cufflinks 32.54 0.0 113.022 High  
cufflinks 15.3158 0.0 50.5619    
cufflinks 19.1411 0.0 63.0754    
cufflinks 4.12015 0.0 17.3423   Low
cufflinks 19.2609 0.0 63.6005    
cufflinks 12.6013 0.0 41.9751    
cufflinks 13.592     High High
cufflinks 2.387        
cufflinks 9.816     High  
cufflinks 5.108        
cufflinks 2.509        
cufflinks 0.307       Low
cufflinks 11.69     High  
cufflinks 9.17     High  
cufflinks 8.648     High  
cufflinks 4.36        
cufflinks 4.202        
cufflinks 1.867        
cufflinks 11.138     High  
cufflinks 12.061     High  
cufflinks 2.708        
cufflinks 5.084        
cufflinks 5.37        

0 Strain