Gene : Glyma.09G249800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11079//PTHR11079:SF76 - CYTOSINE DEAMINASE Genomic Order:  2498
Name:  ? Glyma.09G249800 Secondary Identifier:  ? PAC:30486081
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G249800 0.5kb upstream 0.5kb upstream 5249 true Chr09: 47082637-47087885 Glycine max
Glyma.09G249800 0.5kb upstream 0.5kb upstream 500 false Chr09: 47087386-47087885 Glycine max
Glyma.09G249800 0.5kb downstream 0.5kb downstream 5249 true Chr09: 47082137-47087385 Glycine max
Glyma.09G249800 0.5kb downstream 0.5kb downstream 500 false Chr09: 47082137-47082636 Glycine max
Glyma.09G249800 1.0kb upstream 1.0kb upstream 5749 true Chr09: 47082637-47088385 Glycine max
Glyma.09G249800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47087386-47088385 Glycine max
Glyma.09G249800 1.0kb downstream 1.0kb downstream 5749 true Chr09: 47081637-47087385 Glycine max
Glyma.09G249800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47081637-47082636 Glycine max
Glyma.09G249800 2.0kb upstream 2.0kb upstream 6749 true Chr09: 47082637-47089385 Glycine max
Glyma.09G249800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47087386-47089385 Glycine max
Glyma.09G249800 2.0kb downstream 2.0kb downstream 6749 true Chr09: 47080637-47087385 Glycine max
Glyma.09G249800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47080637-47082636 Glycine max
Glyma.09G249800 5.0kb upstream 5.0kb upstream 9749 true Chr09: 47082637-47092385 Glycine max
Glyma.09G249800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47087386-47092385 Glycine max
Glyma.09G249800 5.0kb downstream 5.0kb downstream 9749 true Chr09: 47077637-47087385 Glycine max
Glyma.09G249800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47077637-47082636 Glycine max
Glyma.09G249800 10.0kb upstream 10.0kb upstream 14749 true Chr09: 47082637-47097385 Glycine max
Glyma.09G249800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47087386-47097385 Glycine max
Glyma.09G249800 10.0kb downstream 10.0kb downstream 14749 true Chr09: 47072637-47087385 Glycine max
Glyma.09G249800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47072637-47082636 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307411 5265 Fabidae View MSA
124062423 5270 Rosid View MSA
123745223 5271 Pentapetalae View MSA
122789870 5272 Eudicot View MSA
122046353 5273 Angiosperm View MSA
121346700 5274 Embryophyte View MSA
123428398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.26094 0.0 6.29489    
cufflinks 2.6813 0.0 12.8314   High
cufflinks 0.481638 0.0 2.90329   Low
cufflinks 1.81566 0.0 8.17128    
cufflinks 1.17668 0.0 5.94989    
cufflinks 0.481198 0.0 2.91268   Low
cufflinks 2.84973 0.0 10.9806   High
cufflinks 1.49263 0.0 11.0787    
cufflinks 0.709721 0.0 4.89256    
cufflinks 0.203        
cufflinks 0.008     Low Low
cufflinks 0.16        
cufflinks 0.108        
cufflinks 0.191        
cufflinks 0.02     Low Low
cufflinks 0.412        
cufflinks 0.028     Low  
cufflinks 0.212        
cufflinks 0.449        
cufflinks 0.404        
cufflinks 0.015     Low Low
cufflinks 0.401        
cufflinks 0.53       High
cufflinks 0.012     Low Low
cufflinks 0.417        
cufflinks 0.027     Low  

0 Strain