Gene : Glyma.09G244700 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  2447
Name:  ? Glyma.09G244700 Secondary Identifier:  ? PAC:30483132
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G244700 0.5kb upstream 0.5kb upstream 5520 true Chr09: 46699718-46705237 Glycine max
Glyma.09G244700 0.5kb upstream 0.5kb upstream 500 false Chr09: 46704738-46705237 Glycine max
Glyma.09G244700 0.5kb downstream 0.5kb downstream 5520 true Chr09: 46699218-46704737 Glycine max
Glyma.09G244700 0.5kb downstream 0.5kb downstream 500 false Chr09: 46699218-46699717 Glycine max
Glyma.09G244700 1.0kb upstream 1.0kb upstream 6020 true Chr09: 46699718-46705737 Glycine max
Glyma.09G244700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46704738-46705737 Glycine max
Glyma.09G244700 1.0kb downstream 1.0kb downstream 6020 true Chr09: 46698718-46704737 Glycine max
Glyma.09G244700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46698718-46699717 Glycine max
Glyma.09G244700 2.0kb upstream 2.0kb upstream 7020 true Chr09: 46699718-46706737 Glycine max
Glyma.09G244700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46704738-46706737 Glycine max
Glyma.09G244700 2.0kb downstream 2.0kb downstream 7020 true Chr09: 46697718-46704737 Glycine max
Glyma.09G244700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46697718-46699717 Glycine max
Glyma.09G244700 5.0kb upstream 5.0kb upstream 10020 true Chr09: 46699718-46709737 Glycine max
Glyma.09G244700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46704738-46709737 Glycine max
Glyma.09G244700 5.0kb downstream 5.0kb downstream 10020 true Chr09: 46694718-46704737 Glycine max
Glyma.09G244700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46694718-46699717 Glycine max
Glyma.09G244700 10.0kb upstream 10.0kb upstream 15020 true Chr09: 46699718-46714737 Glycine max
Glyma.09G244700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46704738-46714737 Glycine max
Glyma.09G244700 10.0kb downstream 10.0kb downstream 15020 true Chr09: 46689718-46704737 Glycine max
Glyma.09G244700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46689718-46699717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
122304355 5265 Fabidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.5988 0.0 31.2784   High
cufflinks 4.30645 0.0 18.5376   Low
cufflinks 8.48724 0.0 30.3479   High
cufflinks 6.2773 0.0 23.6322    
cufflinks 5.65719 0.0 21.9344    
cufflinks 8.49104 0.0 31.1831   High
cufflinks 3.87956 0.0 16.9654   Low
cufflinks 6.11147 0.0 27.4799    
cufflinks 6.56255 0.0 24.5979    
cufflinks 0.799        
cufflinks 1.79       High
cufflinks 0.812        
cufflinks 0.837        
cufflinks 0.737       Low
cufflinks 1.553       High
cufflinks 0.867        
cufflinks 1.157        
cufflinks 0.703       Low
cufflinks 0.638       Low
cufflinks 1.039        
cufflinks 1.424       High
cufflinks 1.035        
cufflinks 0.918        
cufflinks 1.48       High
cufflinks 1.029        
cufflinks 1.119        

0 Strain