Gene : Glyma.09G237900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Genomic Order:  2379
Name:  ? Glyma.09G237900 Secondary Identifier:  ? PAC:30486549
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G237900 0.5kb upstream 0.5kb upstream 4188 true Chr09: 45960080-45964267 Glycine max
Glyma.09G237900 0.5kb upstream 0.5kb upstream 500 false Chr09: 45960080-45960579 Glycine max
Glyma.09G237900 0.5kb downstream 0.5kb downstream 4188 true Chr09: 45960580-45964767 Glycine max
Glyma.09G237900 0.5kb downstream 0.5kb downstream 500 false Chr09: 45964268-45964767 Glycine max
Glyma.09G237900 1.0kb upstream 1.0kb upstream 4688 true Chr09: 45959580-45964267 Glycine max
Glyma.09G237900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45959580-45960579 Glycine max
Glyma.09G237900 1.0kb downstream 1.0kb downstream 4688 true Chr09: 45960580-45965267 Glycine max
Glyma.09G237900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45964268-45965267 Glycine max
Glyma.09G237900 2.0kb upstream 2.0kb upstream 5688 true Chr09: 45958580-45964267 Glycine max
Glyma.09G237900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45958580-45960579 Glycine max
Glyma.09G237900 2.0kb downstream 2.0kb downstream 5688 true Chr09: 45960580-45966267 Glycine max
Glyma.09G237900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45964268-45966267 Glycine max
Glyma.09G237900 5.0kb upstream 5.0kb upstream 8688 true Chr09: 45955580-45964267 Glycine max
Glyma.09G237900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45955580-45960579 Glycine max
Glyma.09G237900 5.0kb downstream 5.0kb downstream 8688 true Chr09: 45960580-45969267 Glycine max
Glyma.09G237900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45964268-45969267 Glycine max
Glyma.09G237900 10.0kb upstream 10.0kb upstream 13688 true Chr09: 45950580-45964267 Glycine max
Glyma.09G237900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45950580-45960579 Glycine max
Glyma.09G237900 10.0kb downstream 10.0kb downstream 13688 true Chr09: 45960580-45974267 Glycine max
Glyma.09G237900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45964268-45974267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316594 5265 Fabidae View MSA
124038195 5270 Rosid View MSA
123647898 5271 Pentapetalae View MSA
122681840 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.71309E-4 0.0 0.00300332 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.04819E-4 0.0 0.00597737 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.24816E-4 0.0 0.00353473 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain