Gene : Glyma.09G279500 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase Genomic Order:  2795
Name:  ? Glyma.09G279500 Secondary Identifier:  ? PAC:30485589
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G279500 0.5kb upstream 0.5kb upstream 13856 true Chr09: 49474689-49488544 Glycine max
Glyma.09G279500 0.5kb upstream 0.5kb upstream 500 false Chr09: 49474689-49475188 Glycine max
Glyma.09G279500 0.5kb downstream 0.5kb downstream 13856 true Chr09: 49475189-49489044 Glycine max
Glyma.09G279500 0.5kb downstream 0.5kb downstream 500 false Chr09: 49488545-49489044 Glycine max
Glyma.09G279500 1.0kb upstream 1.0kb upstream 14356 true Chr09: 49474189-49488544 Glycine max
Glyma.09G279500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49474189-49475188 Glycine max
Glyma.09G279500 1.0kb downstream 1.0kb downstream 14356 true Chr09: 49475189-49489544 Glycine max
Glyma.09G279500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49488545-49489544 Glycine max
Glyma.09G279500 2.0kb upstream 2.0kb upstream 15356 true Chr09: 49473189-49488544 Glycine max
Glyma.09G279500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49473189-49475188 Glycine max
Glyma.09G279500 2.0kb downstream 2.0kb downstream 15356 true Chr09: 49475189-49490544 Glycine max
Glyma.09G279500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49488545-49490544 Glycine max
Glyma.09G279500 5.0kb upstream 5.0kb upstream 18356 true Chr09: 49470189-49488544 Glycine max
Glyma.09G279500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49470189-49475188 Glycine max
Glyma.09G279500 5.0kb downstream 5.0kb downstream 18356 true Chr09: 49475189-49493544 Glycine max
Glyma.09G279500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49488545-49493544 Glycine max
Glyma.09G279500 10.0kb upstream 10.0kb upstream 23356 true Chr09: 49465189-49488544 Glycine max
Glyma.09G279500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49465189-49475188 Glycine max
Glyma.09G279500 10.0kb downstream 10.0kb downstream 23356 true Chr09: 49475189-49498544 Glycine max
Glyma.09G279500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49488545-49498544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304418 5265 Fabidae View MSA
124074775 5270 Rosid View MSA
123747604 5271 Pentapetalae View MSA
122787402 5272 Eudicot View MSA
122042671 5273 Angiosperm View MSA
121345291 5274 Embryophyte View MSA
123380188 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.632 0.0 31.0621    
cufflinks 5.75818 0.0 15.6141   Low
cufflinks 9.93258 0.0 26.4989    
cufflinks 8.94563 0.0 23.8829    
cufflinks 9.91313 0.0 26.4482    
cufflinks 14.1743 0.0 38.0335   High
cufflinks 9.57183 0.0 25.5421    
cufflinks 10.5266 0.0 28.087    
cufflinks 13.6167 0.0 36.4935   High
cufflinks 1.548        
cufflinks 0.954       Low
cufflinks 1.555        
cufflinks 2.63       High
cufflinks 1.543        
cufflinks 1.499        
cufflinks 1.342        
cufflinks 2.693       High
cufflinks 1.541        
cufflinks 1.547        
cufflinks 1.702        
cufflinks 0.997       Low
cufflinks 1.515        
cufflinks 1.225        
cufflinks 1.105       Low
cufflinks 1.442        
cufflinks 1.985        

0 Strain