Gene : Glyma.09G271600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR17098 - NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT Genomic Order:  2716
Name:  ? Glyma.09G271600 Secondary Identifier:  ? PAC:30484780
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G271600 0.5kb upstream 0.5kb upstream 2877 true Chr09: 48826207-48829083 Glycine max
Glyma.09G271600 0.5kb upstream 0.5kb upstream 500 false Chr09: 48828584-48829083 Glycine max
Glyma.09G271600 0.5kb downstream 0.5kb downstream 2877 true Chr09: 48825707-48828583 Glycine max
Glyma.09G271600 0.5kb downstream 0.5kb downstream 500 false Chr09: 48825707-48826206 Glycine max
Glyma.09G271600 1.0kb upstream 1.0kb upstream 3377 true Chr09: 48826207-48829583 Glycine max
Glyma.09G271600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48828584-48829583 Glycine max
Glyma.09G271600 1.0kb downstream 1.0kb downstream 3377 true Chr09: 48825207-48828583 Glycine max
Glyma.09G271600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48825207-48826206 Glycine max
Glyma.09G271600 2.0kb upstream 2.0kb upstream 4377 true Chr09: 48826207-48830583 Glycine max
Glyma.09G271600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48828584-48830583 Glycine max
Glyma.09G271600 2.0kb downstream 2.0kb downstream 4377 true Chr09: 48824207-48828583 Glycine max
Glyma.09G271600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48824207-48826206 Glycine max
Glyma.09G271600 5.0kb upstream 5.0kb upstream 7377 true Chr09: 48826207-48833583 Glycine max
Glyma.09G271600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48828584-48833583 Glycine max
Glyma.09G271600 5.0kb downstream 5.0kb downstream 7377 true Chr09: 48821207-48828583 Glycine max
Glyma.09G271600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48821207-48826206 Glycine max
Glyma.09G271600 10.0kb upstream 10.0kb upstream 12377 true Chr09: 48826207-48838583 Glycine max
Glyma.09G271600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48828584-48838583 Glycine max
Glyma.09G271600 10.0kb downstream 10.0kb downstream 12377 true Chr09: 48816207-48828583 Glycine max
Glyma.09G271600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48816207-48826206 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026299 5273 Angiosperm View MSA
122299728 5265 Fabidae View MSA
124063685 5270 Rosid View MSA
123737855 5271 Pentapetalae View MSA
122792879 5272 Eudicot View MSA
121345909 5274 Embryophyte View MSA
123427209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.1332 0.0 132.393 High Low
cufflinks 42.5717 0.0 182.561 High  
cufflinks 38.5582 0.0 194.943 High  
cufflinks 40.0238 0.0 170.132 High  
cufflinks 53.0327 0.0 228.344 High  
cufflinks 84.7181 0.0 418.23 High High
cufflinks 56.1275 0.0 208.073 High  
cufflinks 42.0387 0.0 193.118 High  
cufflinks 57.4129 0.0 249.896 High  
cufflinks 17.554     High High
cufflinks 9.229     High  
cufflinks 12.649     High  
cufflinks 19.762     High High
cufflinks 21.088     High High
cufflinks 10.271     High  
cufflinks 11.78     High  
cufflinks 7.273     High Low
cufflinks 15.742     High  
cufflinks 12.377     High  
cufflinks 10.231     High  
cufflinks 10.273     High  
cufflinks 10.797     High  
cufflinks 11.066     High  
cufflinks 10.829     High  
cufflinks 11.395     High  
cufflinks 11.434     High  

0 Strain