Gene : Glyma.10G019100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  191
Name:  ? Glyma.10G019100 Secondary Identifier:  ? PAC:30476751
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G019100 0.5kb upstream 0.5kb upstream 3003 true Chr10: 1652905-1655907 Glycine max
Glyma.10G019100 0.5kb upstream 0.5kb upstream 500 false Chr10: 1655408-1655907 Glycine max
Glyma.10G019100 0.5kb downstream 0.5kb downstream 3003 true Chr10: 1652405-1655407 Glycine max
Glyma.10G019100 0.5kb downstream 0.5kb downstream 500 false Chr10: 1652405-1652904 Glycine max
Glyma.10G019100 1.0kb upstream 1.0kb upstream 3503 true Chr10: 1652905-1656407 Glycine max
Glyma.10G019100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1655408-1656407 Glycine max
Glyma.10G019100 1.0kb downstream 1.0kb downstream 3503 true Chr10: 1651905-1655407 Glycine max
Glyma.10G019100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1651905-1652904 Glycine max
Glyma.10G019100 2.0kb upstream 2.0kb upstream 4503 true Chr10: 1652905-1657407 Glycine max
Glyma.10G019100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1655408-1657407 Glycine max
Glyma.10G019100 2.0kb downstream 2.0kb downstream 4503 true Chr10: 1650905-1655407 Glycine max
Glyma.10G019100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1650905-1652904 Glycine max
Glyma.10G019100 5.0kb upstream 5.0kb upstream 7503 true Chr10: 1652905-1660407 Glycine max
Glyma.10G019100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1655408-1660407 Glycine max
Glyma.10G019100 5.0kb downstream 5.0kb downstream 7503 true Chr10: 1647905-1655407 Glycine max
Glyma.10G019100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1647905-1652904 Glycine max
Glyma.10G019100 10.0kb upstream 10.0kb upstream 12503 true Chr10: 1652905-1665407 Glycine max
Glyma.10G019100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1655408-1665407 Glycine max
Glyma.10G019100 10.0kb downstream 10.0kb downstream 12503 true Chr10: 1642905-1655407 Glycine max
Glyma.10G019100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1642905-1652904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309852 5265 Fabidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.7559 0.0 25.1403    
cufflinks 13.9377 0.0 38.319    
cufflinks 9.41454 0.0 26.7919    
cufflinks 8.47517 0.0 24.4241    
cufflinks 16.668 0.0 45.1954    
cufflinks 33.5059 0.0 89.4595 High High
cufflinks 8.47401 0.0 24.4104    
cufflinks 17.9373 0.0 48.5081    
cufflinks 11.6206 0.0 32.4344    
cufflinks 6.749        
cufflinks 5.566     High  
cufflinks 5.93        
cufflinks 11.309     High High
cufflinks 13.3     High High
cufflinks 3.591       Low
cufflinks 5.716        
cufflinks 3.051       Low
cufflinks 5.127        
cufflinks 7.752     High  
cufflinks 4.3        
cufflinks 9.62     High High
cufflinks 4.628        
cufflinks 7.132        
cufflinks 3.976       Low
cufflinks 4.581        
cufflinks 6.837     High  

0 Strain