Protein Family : Small nuclear ribonucleoprotein family protein 122793986

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  60

60 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29986.t000008 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM // SUBFAMILY NOT NAMED R. communis v0.1 2325   29986: 40792-43116
Cucsa.079530 (1 of 2) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM C. sativus v1.0 4971   scaffold00793: 2378816-2383786
Cucsa.274390 (1 of 2) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM C. sativus v1.0 4755   scaffold02532: 73493-78247
orange1.1g031921m.g (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP) C. sinensis v1.1 2360   scaffold00149: 192696-195055
orange1.1g031941m.g (1 of 1) KOG3482 - Small nuclear ribonucleoprotein (snRNP) SMF C. sinensis v1.1 2707   scaffold00001: 5214097-5216803
AT5G27720 (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) A. thaliana TAIR10 emb1644 2044   Chr5: 9815556-9817599
Thhalv10021732m.g (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM E. salsugineum v1.0 2560   scaffold_13: 7792743-7795302
Ciclev10002769m.g (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP) C. clementina v1.0 2395   scaffold_5: 27430780-27433174
Ciclev10022685m.g (1 of 1) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF C. clementina v1.0 2777   scaffold_3: 45676507-45679283
Gorai.004G052500 (1 of 1) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF G. raimondii v2.1 2935   Chr04: 4812215-4815149
Gorai.008G146200 (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP) G. raimondii v2.1 3273   Chr08: 39888541-39891813
Thecc1EG004631 (1 of 1) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) T. cacao v1.1 2783   scaffold_1: 32712781-32715563
Migut.D00203 (1 of 1) KOG3293 - Small nuclear ribonucleoprotein (snRNP) M. guttatus v2.0 2887   scaffold_4: 905287-908173
Cagra.14151s0005 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM C. grandiflora v1.1 2049   Scaffold14151: 13770-15818
Glyma.10G019100 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 2503   Chr10: 1652905-1655407
Glyma.02G155300 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 2710   Chr02: 15911253-15913962
Glyma.03G213600 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM G. max Wm82.a2.v1 2753   Chr03: 41873852-41876604
Brara.F02848 (1 of 3) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. rapa FPsc v1.3 1827   A06: 23229561-23231387
Brara.A03716 (1 of 3) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. rapa FPsc v1.3 1710   A01: 29767724-29769433
Brara.I00458 (1 of 3) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. rapa FPsc v1.3 1838   A09: 2596319-2598156
Bostr.29827s0093 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM B. stricta v1.2 2123   Scaffold29827: 1154986-1157108
Medtr7g108700 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM M. truncatula Mt4.0v1 3011   chr7: 44281904-44284914
Medtr8g058537 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM M. truncatula Mt4.0v1 1846   chr8: 20158080-20159925
Medtr8g058420 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM M. truncatula Mt4.0v1 1886   chr8: 20197505-20199390
Medtr8g091620 (1 of 4) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM M. truncatula Mt4.0v1 3268   chr8: 38226145-38229412
SapurV1A.0052s0650 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) S. purpurea v1.0 2767   chr14: 9946119-9948885
SapurV1A.0155s0260 (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) S. purpurea v1.0 2390   chr02: 18422130-18424519
Eucgr.K03467 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM E. grandis v2.0 3031   Chr11: 43091977-43095007
Prupe.8G259300 (1 of 1) PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM P. persica v2.1 2398   Pp08: 21983830-21986227
Manes.05G063400 (1 of 2) KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF M. esculenta v6.1 2720   Chromosome05: 4860731-4863450

60 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29986.m001592 R. communis v0.1 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Cucsa.079530.1 C. sativus v1.0 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
orange1.1g031941m C. sinensis v1.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Gorai.004G052500.1 G. raimondii v2.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Gorai.008G146200.1 G. raimondii v2.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Migut.D00203.1.p M. guttatus v2.0 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Glyma.10G019100.1.p G. max Wm82.a2.v1 122793986 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
Glyma.03G213600.1.p G. max Wm82.a2.v1 122793986 Small nuclear ribonucleoprotein family protein 3 5272 Eudicot
Bostr.29827s0093.1.p B. stricta v1.2 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Medtr8g091620.2 M. truncatula Mt4.0v1 122793986 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Eucgr.K03467.1.p E. grandis v2.0 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Kalax.0528s0011.1.p K. laxiflora v1.1 122793986 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Kalax.0040s0045.1.p K. laxiflora v1.1 122793986 Small nuclear ribonucleoprotein family protein 4 5272 Eudicot
Aqcoe2G296500.1.p A. coerulea v3.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Aqcoe5G086700.1.p A. coerulea v3.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Kaladp0024s0628.1.p K. fedtschenkoi v1.1 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
AUR62008655-RA C. quinoa v1.0 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
AUR62033113-RA C. quinoa v1.0 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Phvul.007G144000.1.p P. vulgaris v2.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Phvul.001G206200.1.p P. vulgaris v2.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Potri.002G205700.1.p P. trichocarpa v3.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Oeu054128.1 O. europaea v1.0 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
VIT_214s0060g02240.1 V. vinifera v2.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
Lsat_1_v5_gn_5_190620.1 L. sativa V8 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
MD03G1286000 M. domestica v1.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
HanXRQChr09g0248151 H. annuus r1.2 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
HanXRQChr03g0074701 H. annuus r1.2 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
gene35850-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 122793986 Small nuclear ribonucleoprotein family protein 1 5272 Eudicot
Cucsa.274390.1 C. sativus v1.0 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot
orange1.1g031921m C. sinensis v1.1 122793986 Small nuclear ribonucleoprotein family protein 2 5272 Eudicot