Gene : SapurV1A.0155s0260 S. purpurea v1.0

Defline:  (1 of 2) K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Genomic Order:  1571
Name:  ? SapurV1A.0155s0260 Secondary Identifier:  ? PAC:31403712

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0155s0260 0.5kb upstream 0.5kb upstream 2890 true chr02: 18421630-18424519 Salix purpurea
SapurV1A.0155s0260 0.5kb upstream 0.5kb upstream 500 false chr02: 18421630-18422129 Salix purpurea
SapurV1A.0155s0260 0.5kb downstream 0.5kb downstream 2890 true chr02: 18422130-18425019 Salix purpurea
SapurV1A.0155s0260 0.5kb downstream 0.5kb downstream 500 false chr02: 18424520-18425019 Salix purpurea
SapurV1A.0155s0260 1.0kb upstream 1.0kb upstream 3390 true chr02: 18421130-18424519 Salix purpurea
SapurV1A.0155s0260 1.0kb upstream 1.0kb upstream 1000 false chr02: 18421130-18422129 Salix purpurea
SapurV1A.0155s0260 1.0kb downstream 1.0kb downstream 3390 true chr02: 18422130-18425519 Salix purpurea
SapurV1A.0155s0260 1.0kb downstream 1.0kb downstream 1000 false chr02: 18424520-18425519 Salix purpurea
SapurV1A.0155s0260 2.0kb upstream 2.0kb upstream 4390 true chr02: 18420130-18424519 Salix purpurea
SapurV1A.0155s0260 2.0kb upstream 2.0kb upstream 2000 false chr02: 18420130-18422129 Salix purpurea
SapurV1A.0155s0260 2.0kb downstream 2.0kb downstream 4390 true chr02: 18422130-18426519 Salix purpurea
SapurV1A.0155s0260 2.0kb downstream 2.0kb downstream 2000 false chr02: 18424520-18426519 Salix purpurea
SapurV1A.0155s0260 5.0kb upstream 5.0kb upstream 7390 true chr02: 18417130-18424519 Salix purpurea
SapurV1A.0155s0260 5.0kb upstream 5.0kb upstream 5000 false chr02: 18417130-18422129 Salix purpurea
SapurV1A.0155s0260 5.0kb downstream 5.0kb downstream 7390 true chr02: 18422130-18429519 Salix purpurea
SapurV1A.0155s0260 5.0kb downstream 5.0kb downstream 5000 false chr02: 18424520-18429519 Salix purpurea
SapurV1A.0155s0260 10.0kb upstream 10.0kb upstream 12390 true chr02: 18412130-18424519 Salix purpurea
SapurV1A.0155s0260 10.0kb upstream 10.0kb upstream 10000 false chr02: 18412130-18422129 Salix purpurea
SapurV1A.0155s0260 10.0kb downstream 10.0kb downstream 12390 true chr02: 18422130-18434519 Salix purpurea
SapurV1A.0155s0260 10.0kb downstream 10.0kb downstream 10000 false chr02: 18424520-18434519 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464525 5262 Malpighiales View MSA
124247963 5268 Malvidae View MSA
124074135 5270 Rosid View MSA
123737772 5271 Pentapetalae View MSA
122793986 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain